RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 METTL21EPA6NDL7 271 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 FAM220BPB1ANY3 271 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 UBDO15205 165 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 KDM4BO94953 1096 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 CAMTA2O94983 1202 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 ZBTB11O95625 1053 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-216ENST00000545170 ASS1P00966 412 aaKnown RBP8.87□□□□□ -0.99
ATXN3-216ENST00000545170 IFNA16P05015 189 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 TMEM253P0C7T8 217 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 UCHL3P15374 230 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 TPI1P60174 286 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 BLMHQ13867 455 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 EPC2Q52LR7 807 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 GPATCH4Q5T3I0 446 aaKnown RBP8.87□□□□□ -0.99
ATXN3-216ENST00000545170 BICRALQ6AI39 1079 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 C11orf63Q6NUN7 778 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 SATL1Q86VE3 508 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 MAGEC3Q8TD91 643 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 DQX1Q8TE96 717 aaKnown RBP8.87□□□□□ -0.99
ATXN3-216ENST00000545170 ASIC4Q96FT7 647 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 LGR6Q9HBX8 967 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 MAP3K20Q9NYL2 800 aaKnown RBP8.87□□□□□ -0.99
ATXN3-216ENST00000545170 RAPGEFL1Q9UHV5 662 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 CLEC11AQ9Y240 323 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 SH3BP1Q9Y3L3 701 aa8.87□□□□□ -0.99
ATXN3-216ENST00000545170 PRKAB2O43741 272 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 HOXC9P31274 260 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 NAMPTP43490 491 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 DYNLL1P63167 89 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 PCSK7Q16549 785 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 AGAP9Q5VTM2 703 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 SLC13A5Q86YT5 568 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 C10orf53Q8N6V4 93 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 TATDN2Q93075 761 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 FAM120BQ96EK7 910 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 GPATCH1Q9BRR8 931 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 SLITRK2Q9H156 845 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 STARD7Q9NQZ5 370 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 MCUBQ9NWR8 336 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 SPASTQ9UBP0 616 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 RNF112Q9ULX5 631 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 STAP1Q9ULZ2 295 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 KDM5AP29375 1690 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 POGZQ7Z3K3 1410 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 C15orf38-AP3S2A0A0A6YYH1 394 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 PRLRP16471 622 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 RCVRNP35243 200 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 GSTM5P46439 218 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 GDI2P50395 445 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 DSTYKQ6XUX3 929 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ARPINQ7Z6K5 226 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 SNX32Q86XE0 403 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 S100PBPQ96BU1 408 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 OSBPL11Q9BXB4 747 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 KANSL2Q9H9L4 492 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 RPH3AQ9Y2J0 694 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 MAP2K7O14733 419 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 CSPG5O95196 566 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 MSH3P20585 1137 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ADORA2BP29275 332 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 SMTNL2Q2TAL5 461 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 LIN52Q52LA3 116 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ZNF276Q8N554 614 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ZNF540Q8NDQ6 660 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 OSBP2Q969R2 916 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 KCTD10Q9H3F6 313 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 AASDHPPTQ9NRN7 309 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 CNOT7Q9UIV1 285 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 MRPS7Q9Y2R9 242 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ADSLP30566 484 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 CNTN1Q12860 1018 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 DDX39BQ13838 428 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 KCTD2Q14681 263 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 SMCO1Q147U7 214 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 KCNK18Q7Z418 384 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 PHC3Q8NDX5 983 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 MCFD2Q8NI22 146 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ACTRT1Q8TDG2 376 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ATG4AQ8WYN0 398 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ZNF669Q96BR6 464 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 PHF12Q96QT6 1004 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 STARD13Q9Y3M8 1113 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 YEATS2Q9ULM3 1422 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ASMTLO95671 621 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 GARTP22102 1010 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 GP5P40197 560 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 NT5C2P49902 561 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 TMC3Q7Z5M5 1100 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 EMC1Q8N766 993 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 TSEN2Q8NCE0 465 aaKnown RBP8.86□□□□□ -0.99
ATXN3-216ENST00000545170 MOSPD2Q8NHP6 518 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ITFG1Q8TB96 612 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 TCP10LQ8TDR4 215 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 EEF1AKMT1Q8WVE0 214 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 NACC2Q96BF6 587 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 UCKL1Q9NWZ5 548 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 ATP10DQ9P241 1426 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 TBC1D24Q9ULP9 559 aa8.86□□□□□ -0.99
ATXN3-216ENST00000545170 NCF1BA6NI72 391 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-216ENST00000545170 NCF1CA8MVU1 366 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms