RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 H0YGN5 161 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 ALOX15BO15296 676 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 PRPF4O43172 522 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS50-220ENST00000544910 SH3BP5O60239 455 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 FBXO21O94952 628 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 ACADSP16219 412 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 GRIK1P39086 918 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SERPINB4P48594 390 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 NAB1Q13506 487 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 TMEM154Q6P9G4 183 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SLC27A1Q6PCB7 646 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 C16orf89Q6UX73 402 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 ABI1Q8IZP0 508 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 ZNF516Q92618 1163 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 INPP5DQ92835 1189 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 VPS39Q96JC1 886 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 ELMO2Q96JJ3 720 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 GPR20Q99678 358 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 DHX33Q9H6R0 707 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 GPRC5DQ9NZD1 345 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 CPSF3Q9UKF6 684 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 NFS1Q9Y697 457 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 WDR27A2RRH5 827 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 C5orf60A6NFR6 353 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 NCAM1P13591 858 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 MMP8P22894 467 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 FAAP100Q0VG06 881 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 PDK4Q16654 411 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SLC39A4Q6P5W5 647 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 TRIM67Q6ZTA4 783 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 PLEKHH3Q7Z736 793 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 ARID3BQ8IVW6 561 aaPredicted RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 SCN4BQ8IWT1 228 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 LMO3Q8TAP4 145 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SLC26A7Q8TE54 656 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 USP33Q8TEY7 942 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 OXNAD1Q96HP4 312 aaPredicted RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 TMEM237Q96Q45 408 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 TASP1Q9H6P5 420 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 KRT82Q9NSB4 513 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 LRFN2Q9ULH4 789 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 CDYLQ9Y232 598 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 B4GALT5O43286 388 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 EDIL3O43854 480 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 PIGRP01833 764 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CCDC130P13994 396 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 AXLP30530 894 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CDK16Q00536 496 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 BMPR2Q13873 1038 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 RASA2Q15283 850 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 FBXO47Q5MNV8 452 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 BBS12Q6ZW61 710 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 LINC00523Q86TU6 105 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 COLGALT1Q8NBJ5 622 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 DTX3LQ8TDB6 740 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 EXT2Q93063 718 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 DACT3Q96B18 629 aaPredicted RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 MAML3Q96JK9 1138 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 C12orf42Q96LP6 360 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 TTC1Q99614 292 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 SIKE1Q9BRV8 207 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 BTBD10Q9BSF8 475 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 MAGEB5Q9BZ81 275 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 SIK2Q9H0K1 926 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CATSPERBQ9H7T0 1116 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 PRDM16Q9HAZ2 1276 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 XPNPEP1Q9NQW7 623 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 SAR1AQ9NR31 198 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CLUHO75153 1309 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CYB561D2O14569 222 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 ZNF862O60290 1169 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 B4GALT4O60513 344 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 MOCS2O96007 188 aaPredicted RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 ATP5BP06576 529 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 KCNA3P22001 575 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 ADRA1DP25100 572 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 MED21Q13503 144 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 LAMB3Q13751 1172 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 KPNB1Q14974 876 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 EFTUD2Q15029 972 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS50-220ENST00000544910 KIF19Q2TAC6 998 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 RARS2Q5T160 578 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 TRABD2AQ86V40 505 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 RYBPQ8N488 228 aaPredicted RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 CCNYL1Q8N7R7 359 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 MCUQ8NE86 351 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 AGR3Q8TD06 166 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 COPS5Q92905 334 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CMTM5Q96DZ9 223 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CEP19Q96LK0 163 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 FBXL18Q96ME1 805 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 SRPK1Q96SB4 655 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 THTPAQ9BU02 230 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CDY2AQ9Y6F7 541 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 CDY1Q9Y6F8 540 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 COL1A2P08123 1366 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 EIF4E1BA6NMX2 242 aaKnown RBP5.97□□□□□ -1.45
VPS50-220ENST00000544910 ODC1P11926 461 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 RBL1P28749 1068 aa5.97□□□□□ -1.45
VPS50-220ENST00000544910 ASPAP45381 313 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms