RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 SCFD1Q8WVM8 642 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 ELMO3Q96BJ8 720 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 SMARCD1Q96GM5 515 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 TOE1Q96GM8 510 aaKnown RBP16.36■□□□□ 0.21
CD4-212ENST00000544344 MKRN2Q9H000 416 aaKnown RBP16.36■□□□□ 0.21
CD4-212ENST00000544344 VRTNQ9H8Y1 702 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 CSNK1G1Q9HCP0 422 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 SCUBE2Q9NQ36 999 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 CYLDQ9NQC7 956 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 ITM2CQ9NQX7 267 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 KRT82Q9NSB4 513 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 OSER1Q9NX31 292 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 WDR35Q9P2L0 1181 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 DKK4Q9UBT3 224 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 FBXO10Q9UK96 956 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 STON1Q9Y6Q2 735 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 MYH10P35580 1976 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 EIF3DO15371 548 aaKnown RBP eCLIP16.35■□□□□ 0.21
CD4-212ENST00000544344 ZNF883P0CG24 379 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 NCAM1P13591 858 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 ATICP31939 592 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 DGKGP49619 791 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 ENPP2Q13822 863 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 Q6ZNB5 142 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 STXBP4Q6ZWJ1 553 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 MARCH9Q86YJ5 346 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 ZCCHC9Q8N567 271 aaKnown RBP16.35■□□□□ 0.21
CD4-212ENST00000544344 C1orf216Q8TAB5 229 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 PLEKHO2Q8TD55 490 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 MED10Q9BTT4 135 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 GPR174Q9BXC1 333 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 NACA2Q9H009 215 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 FNDC3AQ9Y2H6 1198 aaKnown RBP16.35■□□□□ 0.21
CD4-212ENST00000544344 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.35■□□□□ 0.21
CD4-212ENST00000544344 MORC2Q9Y6X9 1032 aaPredicted RBP16.35■□□□□ 0.21
CD4-212ENST00000544344 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 CABIN1Q9Y6J0 2220 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 CKAP5Q14008 2032 aa16.35■□□□□ 0.21
CD4-212ENST00000544344 GOLGA4Q13439 2230 aaKnown RBP16.34■□□□□ 0.21
CD4-212ENST00000544344 CLIC2O15247 247 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 CILPO75339 1184 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 AP1G2O75843 785 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 NEFLP07196 543 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 ATXN1LP0C7T5 689 aaKnown RBP16.34■□□□□ 0.21
CD4-212ENST00000544344 CCDC130P13994 396 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 ACO1P21399 889 aaKnown RBP16.34■□□□□ 0.21
CD4-212ENST00000544344 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
CD4-212ENST00000544344 TRPC3Q13507 836 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 GPRIN1Q7Z2K8 1008 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 PDILTQ8N807 584 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 XXYLT1Q8NBI6 393 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 CADM4Q8NFZ8 388 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 SETD7Q8WTS6 366 aaKnown RBP16.34■□□□□ 0.21
CD4-212ENST00000544344 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
CD4-212ENST00000544344 GAREM1Q9H706 876 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 PRDM16Q9HAZ2 1276 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 NMUR1Q9HB89 426 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 TM7SF3Q9NS93 570 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 KBTBD4Q9NVX7 518 aa16.34■□□□□ 0.21
CD4-212ENST00000544344 FLNBO75369 2602 aaKnown RBP16.34■□□□□ 0.21
CD4-212ENST00000544344 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.2
CD4-212ENST00000544344 METTL12A8MUP2 240 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 MEI4A8MW99 385 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 IGLV3-19P01714 112 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 IL12RB1P42701 662 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 CASP4P49662 377 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 TPMTP51580 245 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 CYP2J2P51589 502 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 CAMK2BQ13554 666 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 E2F4Q16254 413 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 HLA-BQ31612 363 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 ACOT1Q86TX2 421 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 BHMTQ93088 406 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 LRIG1Q96JA1 1093 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 TNIP3Q96KP6 325 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 TNMDQ9H2S6 317 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 TLR8Q9NR97 1041 aaKnown RBP16.33■□□□□ 0.2
CD4-212ENST00000544344 PLK2Q9NYY3 685 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 THAP10Q9P2Z0 257 aaPredicted RBP16.33■□□□□ 0.2
CD4-212ENST00000544344 HMGXB4Q9UGU5 601 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 SLC27A6Q9Y2P4 619 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 SLCO1B1Q9Y6L6 691 aa16.33■□□□□ 0.2
CD4-212ENST00000544344 HHLA1C9JL84 531 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 MDM4O15151 490 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 BCAT2O15382 392 aaPredicted RBP16.32■□□□□ 0.2
CD4-212ENST00000544344 CYP26A1O43174 497 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 VNN1O95497 513 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 ATP5C1P36542 298 aaKnown RBP16.32■□□□□ 0.2
CD4-212ENST00000544344 MAP3K7CLP57077 242 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 EHHADHQ08426 723 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 ORC1Q13415 861 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 NUMA1Q14980 2115 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 DCAF12L1Q5VU92 463 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 SCARA5Q6ZMJ2 495 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 CRYBG2Q8N1P7 616 aa16.32■□□□□ 0.2
CD4-212ENST00000544344 RBBP8NLQ8NC74 664 aaPredicted RBP16.32■□□□□ 0.2
CD4-212ENST00000544344 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms