RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 KLHL29Q96CT2 875 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 APOPT1Q96IL0 206 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 OSMRQ99650 979 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 B3GNT5Q9BYG0 378 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 NXF3Q9H4D5 531 aaKnown RBP18.4■□□□□ 0.54
SCARB1-208ENST00000544327 GJD2Q9UKL4 321 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 HEY1Q9Y5J3 304 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 IKBKGQ9Y6K9 419 aa18.4■□□□□ 0.54
SCARB1-208ENST00000544327 XPOTO43592 962 aaKnown RBP18.39■□□□□ 0.54
SCARB1-208ENST00000544327 INHBAP08476 426 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 YWHAGP61981 247 aaKnown RBP eCLIP18.39■□□□□ 0.54
SCARB1-208ENST00000544327 ADAM17P78536 824 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 SEPT7Q16181 437 aaKnown RBP18.39■□□□□ 0.54
SCARB1-208ENST00000544327 WLSQ5T9L3 541 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 STRADAQ7RTN6 431 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 SLC26A11Q86WA9 606 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 QKIQ96PU8 341 aaKnown RBP eCLIP18.39■□□□□ 0.54
SCARB1-208ENST00000544327 PARK7Q99497 189 aaKnown RBP18.39■□□□□ 0.54
SCARB1-208ENST00000544327 MYLK2Q9H1R3 596 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 NOD2Q9HC29 1040 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 MTMR10Q9NXD2 777 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 GNEQ9Y223 722 aaKnown RBP18.39■□□□□ 0.54
SCARB1-208ENST00000544327 CHKBQ9Y259 395 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 HES2Q9Y543 173 aa18.39■□□□□ 0.54
SCARB1-208ENST00000544327 CYP2C9P11712 490 aa18.39■□□□□ 0.53
SCARB1-208ENST00000544327 GNL1P36915 607 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-208ENST00000544327 ETV4P43268 484 aa18.39■□□□□ 0.53
SCARB1-208ENST00000544327 TMEM62Q0P6H9 643 aa18.39■□□□□ 0.53
SCARB1-208ENST00000544327 PREPLQ4J6C6 727 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-208ENST00000544327 ETNK1Q9HBU6 452 aa18.39■□□□□ 0.53
SCARB1-208ENST00000544327 RCOR3Q9P2K3 495 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-208ENST00000544327 SMIM28A0A1B0GU29 152 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 IQCA1LA6NCM1 817 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 GLTPD2A6NH11 291 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 KPNA7A9QM74 516 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 C2CD2LO14523 706 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 LPXNO60711 386 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 IL1BP01584 269 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 TFE3P19532 575 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-208ENST00000544327 FAAP100Q0VG06 881 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 MTM1Q13496 603 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 GLRA4Q5JXX5 417 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 TTC39BQ5VTQ0 682 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-208ENST00000544327 PNMA8AQ86V59 439 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-208ENST00000544327 PSTKQ8IV42 348 aaKnown RBP18.38■□□□□ 0.53
SCARB1-208ENST00000544327 CLEC4CQ8WTT0 213 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 SERAC1Q96JX3 654 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 LRRC37BQ96QE4 947 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 ADAM33Q9BZ11 813 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 TRIM6Q9C030 488 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-208ENST00000544327 SNX25Q9H3E2 840 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 PLAC1Q9HBJ0 212 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 SLC17A7Q9P2U7 560 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 AP4E1Q9UPM8 1137 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 USP3Q9Y6I4 520 aa18.38■□□□□ 0.53
SCARB1-208ENST00000544327 HAS3O00219 553 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 AVILO75366 819 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 PIAS1O75925 651 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 FAM163BP0C2L3 166 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 CCDC130P13994 396 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 PPP6R3Q5H9R7 873 aaPredicted RBP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 UBXN11Q5T124 520 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 FYB2Q5VWT5 728 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 CSPG4P5Q96PW8 444 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 KCTD15Q96SI1 283 aaPredicted RBP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 LPIN3Q9BQK8 851 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 DHX35Q9H5Z1 703 aaKnown RBP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 MKS1Q9NXB0 559 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 ZC3H7BQ9UGR2 993 aaKnown RBP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 GINS2Q9Y248 185 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 HACD1B0YJ81 288 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 XPO1O14980 1071 aaKnown RBP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 SPTLC1O15269 473 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 WARSP23381 471 aaKnown RBP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 ADORA2BP29275 332 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 TAF6P49848 677 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 FKBP1BP68106 108 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 GBE1Q04446 702 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 SLC10A2Q12908 348 aaPredicted RBP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 MFSD10Q14728 455 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 SNX17Q15036 470 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 PARP6Q2NL67 630 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 SV2CQ496J9 727 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 EFHC1Q5JVL4 640 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 ZNF534Q76KX8 674 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 PRPF39Q86UA1 669 aaKnown RBP18.37■□□□□ 0.53
SCARB1-208ENST00000544327 LRRC6Q86X45 466 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 VPS52Q8N1B4 723 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 C7orf31Q8N865 590 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 CCDC110Q8TBZ0 833 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 ERP27Q96DN0 273 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 CFAP36Q96G28 342 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 LRMDAQ9H2I8 198 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 MANSC1Q9H8J5 431 aa18.37■□□□□ 0.53
SCARB1-208ENST00000544327 DYNC1LI2O43237 492 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-208ENST00000544327 HCRTO43612 131 aa18.36■□□□□ 0.53
SCARB1-208ENST00000544327 DGKIO75912 1065 aa18.36■□□□□ 0.53
SCARB1-208ENST00000544327 APOEP02649 317 aa18.36■□□□□ 0.53
SCARB1-208ENST00000544327 TROVE2P10155 538 aaKnown RBP eCLIP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms