RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 SIPA1Q96FS4 1042 aa12.89□□□□□ -0.35
ITM2C-209ENST00000543957 PCED1AQ9H1Q7 454 aa12.89□□□□□ -0.35
ITM2C-209ENST00000543957 PARVGQ9HBI0 331 aa12.89□□□□□ -0.35
ITM2C-209ENST00000543957 WDR35Q9P2L0 1181 aa12.89□□□□□ -0.35
ITM2C-209ENST00000543957 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
ITM2C-209ENST00000543957 LAD1O00515 517 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 PDGFRBP09619 1106 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 IRF1P10914 325 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 YWHAQP27348 245 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 ABCD1P33897 745 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 DGKGP49619 791 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 ZNF131P52739 623 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 ZNF132P52740 706 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 RBP5P82980 135 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 TBC1D25Q3MII6 688 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 LAYNQ6UX15 382 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 FAM124AQ86V42 546 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 ERICH1Q86X53 443 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
ITM2C-209ENST00000543957 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 MYCBPAPQ8TBZ2 947 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 KBTBD7Q8WVZ9 684 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 LGMNQ99538 433 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 ZHX3Q9H4I2 956 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 TM9SF3Q9HD45 589 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 OSGEPQ9NPF4 335 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 CHORDC1Q9UHD1 332 aaPredicted RBP12.88□□□□□ -0.35
ITM2C-209ENST00000543957 ITGA11Q9UKX5 1188 aa12.88□□□□□ -0.35
ITM2C-209ENST00000543957 CBX4O00257 560 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 PAPSS1O43252 624 aaPredicted RBP12.87□□□□□ -0.35
ITM2C-209ENST00000543957 SYNCRIPO60506 623 aaKnown RBP12.87□□□□□ -0.35
ITM2C-209ENST00000543957 LDOC1O95751 146 aaPredicted RBP12.87□□□□□ -0.35
ITM2C-209ENST00000543957 CISD3P0C7P0 127 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 ACADMP11310 421 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 ADSSP30520 456 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 PRPHP41219 470 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 CSRP3P50461 194 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 DNAJC3Q13217 504 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 ORC1Q13415 861 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 POSTNQ15063 836 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 KCNT1Q5JUK3 1230 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 ARHGAP40Q5TG30 622 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 HS2ST1Q7LGA3 356 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 LIMS2Q7Z4I7 341 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 CACUL1Q86Y37 369 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 OVCA2Q8WZ82 227 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 FBXO32Q969P5 355 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 FAM84AQ96KN4 292 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 CNDP2Q96KP4 475 aaKnown RBP12.87□□□□□ -0.35
ITM2C-209ENST00000543957 FIZ1Q96SL8 496 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 TRIM9Q9C026 710 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 C6orf106Q9H6K1 298 aaPredicted RBP12.87□□□□□ -0.35
ITM2C-209ENST00000543957 CCSER2Q9H7U1 834 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 CPNE5Q9HCH3 593 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 TMEM30AQ9NV96 361 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 MARK1Q9P0L2 795 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 SIX4Q9UIU6 781 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.87□□□□□ -0.35
ITM2C-209ENST00000543957 KIF3AQ9Y496 699 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 TMEM131Q92545 1883 aa12.87□□□□□ -0.35
ITM2C-209ENST00000543957 COL5A1P20908 1838 aaPredicted RBP12.86□□□□□ -0.35
ITM2C-209ENST00000543957 NPC1O15118 1278 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 DFNA5O60443 496 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 CTSKP43235 329 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 ACADVLP49748 655 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 TUBP50607 506 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 UCNP55089 124 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 TMPRSS3P57727 454 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 DHX8Q14562 1220 aaKnown RBP12.86□□□□□ -0.35
ITM2C-209ENST00000543957 MDH1BQ5I0G3 518 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 BROXQ5VW32 411 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 SNX30Q5VWJ9 437 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 HTR3DQ70Z44 454 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 GPBP1Q86WP2 473 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 GATAD2AQ86YP4 633 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 ZNF248Q8NDW4 579 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 BHMTQ93088 406 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 NAF1Q96HR8 494 aaKnown RBP12.86□□□□□ -0.35
ITM2C-209ENST00000543957 NACA2Q9H009 215 aa12.86□□□□□ -0.35
ITM2C-209ENST00000543957 THAP10Q9P2Z0 257 aaPredicted RBP12.86□□□□□ -0.35
ITM2C-209ENST00000543957 USP9XQ93008 2570 aaPredicted RBP12.85□□□□□ -0.35
ITM2C-209ENST00000543957 A0A1B0GTQ1 180 aa12.85□□□□□ -0.35
ITM2C-209ENST00000543957 GREM1O60565 184 aa12.85□□□□□ -0.35
ITM2C-209ENST00000543957 RTN3O95197 1032 aaPredicted RBP12.85□□□□□ -0.35
ITM2C-209ENST00000543957 NTRK1P04629 796 aa12.85□□□□□ -0.35
ITM2C-209ENST00000543957 ACO1P21399 889 aaKnown RBP12.85□□□□□ -0.35
ITM2C-209ENST00000543957 SYT1P21579 422 aa12.85□□□□□ -0.35
ITM2C-209ENST00000543957 WARSP23381 471 aaKnown RBP12.85□□□□□ -0.35
ITM2C-209ENST00000543957 ACSL1P33121 698 aa12.85□□□□□ -0.35
ITM2C-209ENST00000543957 COPAP53621 1224 aa12.85□□□□□ -0.35
ITM2C-209ENST00000543957 ENPP2Q13822 863 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms