RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 FLT3P36888 993 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 SMAD4Q13485 552 aaKnown RBP24.14■■□□□ 1.46
HOMER3-205ENST00000542541 SYPL2Q5VXT5 272 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 EMC1Q8N766 993 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 MAB21L3Q8N8X9 362 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 FNIP1Q8TF40 1166 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 RXFP2Q8WXD0 754 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 SLITRK6Q9H5Y7 841 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 CCSER2Q9H7U1 834 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.14■■□□□ 1.46
HOMER3-205ENST00000542541 DNMT3LQ9UJW3 386 aa24.14■■□□□ 1.46
HOMER3-205ENST00000542541 USP15Q9Y4E8 981 aaPredicted RBP24.14■■□□□ 1.46
HOMER3-205ENST00000542541 TRAV19A0A0A6YYK7 116 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 MYO1FO00160 1098 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 GPD1P21695 349 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 NOP2P46087 812 aaKnown RBP24.13■■□□□ 1.45
HOMER3-205ENST00000542541 CBX2Q14781 532 aaPredicted RBP24.13■■□□□ 1.45
HOMER3-205ENST00000542541 MSANTD2Q6P1R3 559 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 ZNF662Q6ZS27 426 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 ITFG1Q8TB96 612 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 SUSD6Q92537 303 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 LACRTQ9GZZ8 138 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 TFR2Q9UP52 801 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 BRWD1Q9NSI6 2320 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 SPTBN5Q9NRC6 3674 aaKnown RBP24.13■■□□□ 1.45
HOMER3-205ENST00000542541 ZNF638Q14966 1978 aaKnown RBP24.13■■□□□ 1.45
HOMER3-205ENST00000542541 C2orf78A6NCI8 922 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 COCHO43405 550 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 MTA2O94776 668 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 GBP1P32455 592 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 PTPN9P43378 593 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 ZNF143P52747 638 aaPredicted RBP24.13■■□□□ 1.45
HOMER3-205ENST00000542541 SLC25A52Q3SY17 297 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 SLC46A2Q9BY10 475 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 GDE1Q9NZC3 331 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 CDH22Q9UJ99 828 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 ANAPC7Q9UJX3 599 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 NUDT5Q9UKK9 219 aa24.13■■□□□ 1.45
HOMER3-205ENST00000542541 XIRP2A4UGR9 3374 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 CEBPBP17676 345 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 AVPR1AP37288 418 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 EFEMP1Q12805 493 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 LEXMQ3ZCV2 418 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 GET4Q7L5D6 327 aaPredicted RBP24.12■■□□□ 1.45
HOMER3-205ENST00000542541 ING5Q8WYH8 240 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 NT5C3BQ969T7 300 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 NPY6RQ99463 290 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 CNPY3Q9BT09 278 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 SMOC2Q9H3U7 446 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 OSGEPQ9NPF4 335 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 MARCH2Q9P0N8 246 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 IP6K2Q9UHH9 426 aa24.12■■□□□ 1.45
HOMER3-205ENST00000542541 DPYSL4O14531 572 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 CCP110O43303 1012 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 OLFM2O95897 454 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 TBX18O95935 607 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 F9P00740 461 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 CKMP06732 381 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 ARHGAP25P42331 645 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 KPNA1P52294 538 aaPredicted RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 HADHBP55084 474 aaKnown RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 NAP1L1P55209 391 aaKnown RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 PIGHQ14442 188 aaPredicted RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 IFI16Q16666 785 aaKnown RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 PUS10Q3MIT2 529 aaKnown RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 ARHGAP29Q52LW3 1261 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 CMTM8Q8IZV2 173 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 ARL14EPQ8N8R7 260 aaPredicted RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 DQX1Q8TE96 717 aaKnown RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 FGF13Q92913 245 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 CFAP57Q96MR6 1250 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 SERPINB11Q96P15 392 aa24.11■■□□□ 1.45
HOMER3-205ENST00000542541 ZFP37Q9Y6Q3 630 aaPredicted RBP24.11■■□□□ 1.45
HOMER3-205ENST00000542541 MBTPS2O43462 519 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 TRUB2O95900 331 aaKnown RBP24.1■■□□□ 1.45
HOMER3-205ENST00000542541 MBL2P11226 248 aaPredicted RBP24.1■■□□□ 1.45
HOMER3-205ENST00000542541 PSMA2P25787 234 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 SULT1E1P49888 294 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 ACAP1Q15027 740 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 CCDC14Q49A88 953 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 STXBP5Q5T5C0 1151 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 TRNP1Q6NT89 227 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 NPAS3Q8IXF0 933 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 CYP2S1Q96SQ9 504 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 NCAPGQ9BPX3 1015 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 RNF38Q9H0F5 515 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 POMKQ9H5K3 350 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 FAM204AQ9H8W3 233 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 RASAL2Q9UJF2 1139 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 CDH7Q9ULB5 785 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 PYCARDQ9ULZ3 195 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 FAM50BQ9Y247 325 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 DUSP10Q9Y6W6 482 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 MYO16Q9Y6X6 1858 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 GRXCR2A6NFK2 248 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 M0QYT0 321 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 NRG2O14511 850 aaPredicted RBP24.1■■□□□ 1.45
HOMER3-205ENST00000542541 SLC7A9P82251 487 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 COG7P83436 770 aa24.1■■□□□ 1.45
HOMER3-205ENST00000542541 MIB1Q86YT6 1006 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms