RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 TBXAS1P24557 533 aaPredicted RBP16.44■□□□□ 0.22
VPS33A-206ENST00000542310 PMS1P54277 932 aaKnown RBP16.44■□□□□ 0.22
VPS33A-206ENST00000542310 CUL2Q13617 745 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 C10orf120Q5SQS8 335 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 ANKRD40Q6AI12 368 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 GRAMD4Q6IC98 578 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 TMEM92Q6UXU6 159 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 TMEM25Q86YD3 366 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 ANKRD52Q8NB46 1076 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 SLC35C1Q96A29 364 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 SPACA7Q96KW9 195 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 CEP63Q96MT8 703 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 TPSD1Q9BZJ3 242 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
VPS33A-206ENST00000542310 ZNF510Q9Y2H8 683 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 CEP192Q8TEP8 1941 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 BCLAF3A2AJT9 711 aaKnown RBP16.43■□□□□ 0.22
VPS33A-206ENST00000542310 TBC1D3BA6NDS4 549 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 GDF9O60383 454 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 ADAM23O75077 832 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 HNRNPLP14866 589 aaKnown RBP eCLIP16.43■□□□□ 0.223e-7■□□□□ 11.2
VPS33A-206ENST00000542310 GBP1P32455 592 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 BCAT1P54687 386 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 SF3A2Q15428 464 aaKnown RBP16.43■□□□□ 0.22
VPS33A-206ENST00000542310 C10orf76Q5T2E6 689 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 SCD5Q86SK9 330 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 ZNF513Q8N8E2 541 aaPredicted RBP16.43■□□□□ 0.22
VPS33A-206ENST00000542310 DHTKD1Q96HY7 919 aaPredicted RBP16.43■□□□□ 0.22
VPS33A-206ENST00000542310 BBS2Q9BXC9 721 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 DNAJC17Q9NVM6 304 aaKnown RBP16.43■□□□□ 0.22
VPS33A-206ENST00000542310 SPTBN2O15020 2390 aa16.43■□□□□ 0.22
VPS33A-206ENST00000542310 DCDC2BA2VCK2 349 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 TRIM49BA6NDI0 452 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 ANTXRLA6NF34 631 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 NEDD8-MDP1E9PL57 170 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 XPO1O14980 1071 aaKnown RBP16.42■□□□□ 0.22
VPS33A-206ENST00000542310 DCLK1O15075 740 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 STC2O76061 302 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 TYRP14679 529 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 P2RY2P41231 377 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 COG7P83436 770 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 BYSLQ13895 437 aaKnown RBP16.42■□□□□ 0.22
VPS33A-206ENST00000542310 IL31Q6EBC2 164 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 PIGZQ86VD9 579 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 NAT16Q8N8M0 369 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 TATDN2Q93075 761 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 DCLK3Q9C098 648 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 LAMA1P25391 3075 aa16.42■□□□□ 0.22
VPS33A-206ENST00000542310 TCRBV21S2A2A0A5A6 115 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 MDM4O15151 490 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 CAVIN2O95810 425 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 DPP6P42658 865 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 CREB5Q02930 508 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 BST2Q10589 180 aaKnown RBP16.41■□□□□ 0.22
VPS33A-206ENST00000542310 CCDC6Q16204 474 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 SGO2Q562F6 1265 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 SPDYCQ5MJ68 293 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 PM20D1Q6GTS8 502 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 TTC30AQ86WT1 665 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 UBR7Q8N806 425 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 BCCIPQ9P287 314 aaKnown RBP eCLIP16.41■□□□□ 0.22
VPS33A-206ENST00000542310 HESX1Q9UBX0 185 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 RASAL2Q9UJF2 1139 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 TSPAN16Q9UKR8 245 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 STRIP2Q9ULQ0 834 aa16.41■□□□□ 0.22
VPS33A-206ENST00000542310 P4HA2O15460 535 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 PENKP01210 267 aaPredicted RBP16.4■□□□□ 0.22
VPS33A-206ENST00000542310 ADRB1P08588 477 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 SETSIPP0DME0 302 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 HOXB2P14652 356 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 BCKDHBP21953 392 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 NTSR1P30989 418 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 CHKAP35790 457 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 FMO5P49326 533 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 DGKGP49619 791 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 YWHAGP61981 247 aaKnown RBP eCLIP16.4■□□□□ 0.22
VPS33A-206ENST00000542310 GOLGA7BQ2TAP0 167 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 PPM1JQ5JR12 505 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 STPG1Q5TH74 334 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 TPGS1Q6ZTW0 290 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 CYP2U1Q7Z449 544 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 SCML4Q8N228 414 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 HMGB4Q8WW32 186 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 ERCC4Q92889 916 aaPredicted RBP16.4■□□□□ 0.22
VPS33A-206ENST00000542310 PLD4Q96BZ4 506 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 OLA1Q9NTK5 396 aaKnown RBP16.4■□□□□ 0.22
VPS33A-206ENST00000542310 FBXO10Q9UK96 956 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 NUDT5Q9UKK9 219 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 CKAP5Q14008 2032 aa16.4■□□□□ 0.22
VPS33A-206ENST00000542310 CNOT1A5YKK6 2376 aaKnown RBP16.4■□□□□ 0.22
VPS33A-206ENST00000542310 BICDL2A1A5D9 508 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 GFRA2O00451 464 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 ZBED1O96006 694 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 PAEPP09466 180 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 VDRP11473 427 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 CORO1AP31146 461 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms