RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 RNF139Q8WU17 664 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 SMARCAL1Q9NZC9 954 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 CALCOCO1Q9P1Z2 691 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 RNF14Q9UBS8 474 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 ENDOD1O94919 500 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 LRG1P02750 347 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 C8AP07357 584 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 CLCN4P51793 760 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 KCNT1Q5JUK3 1230 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 AADACL2Q6P093 401 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 RSRC2Q7L4I2 434 aaKnown RBP16.84■□□□□ 0.29
TRAF3-204ENST00000539721 BNIPLQ7Z465 357 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 ITIH5Q86UX2 942 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 CCDC50Q8IVM0 306 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 RASGEF1CQ8N431 466 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 CEP112Q8N8E3 955 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 MNS1Q8NEH6 495 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 PDZD8Q8NEN9 1154 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 EXD1Q8NHP7 514 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 ACTRT1Q8TDG2 376 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 DQX1Q8TE96 717 aaKnown RBP16.84■□□□□ 0.29
TRAF3-204ENST00000539721 ACSF2Q96CM8 615 aaPredicted RBP16.84■□□□□ 0.29
TRAF3-204ENST00000539721 RBM41Q96IZ5 413 aaKnown RBP16.84■□□□□ 0.29
TRAF3-204ENST00000539721 DDIT4Q9NX09 232 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 OSER1Q9NX31 292 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 ZRANB2O95218 330 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAF3-204ENST00000539721 SLU7O95391 586 aaKnown RBP16.84■□□□□ 0.29
TRAF3-204ENST00000539721 RARAP10276 462 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 RALAP11233 206 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 HMGA1P17096 107 aaKnown RBP16.84■□□□□ 0.29
TRAF3-204ENST00000539721 GBP1P32455 592 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 RGS19P49795 217 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 TAC4Q86UU9 113 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 FAM131BQ86XD5 332 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 GDPD5Q8WTR4 605 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 OVCA2Q8WZ82 227 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 HSPH1Q92598 858 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 PGAP3Q96FM1 320 aaPredicted RBP16.84■□□□□ 0.29
TRAF3-204ENST00000539721 LMAN2LQ9H0V9 348 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 PIGVQ9NUD9 493 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 CLIC5Q9NZA1 410 aa16.84■□□□□ 0.29
TRAF3-204ENST00000539721 LRRD1A4D1F6 860 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 PI4K2BG5E9Z4 385 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 PGRMC1O00264 195 aaKnown RBP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 PDE2AO00408 941 aaPredicted RBP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 CLASP2O75122 1294 aaKnown RBP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 F9P00740 461 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 RARGP13631 454 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 CETN2P41208 172 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 BOLA3Q53S33 107 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 CHRDL2Q6WN34 429 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 CYP4V2Q6ZWL3 525 aaPredicted RBP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 SND1Q7KZF4 910 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 RCOR2Q8IZ40 523 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 PSMG2Q969U7 264 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 RNF25Q96BH1 459 aaPredicted RBP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 TIFAQ96CG3 184 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 TRMT2BQ96GJ1 504 aaKnown RBP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 MYRFLQ96LU7 910 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 ZNF512Q96ME7 567 aaPredicted RBP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 SMOC2Q9H3U7 446 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRAF3-204ENST00000539721 NUDT5Q9UKK9 219 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 ASB3Q9Y575 518 aa16.83■□□□□ 0.28
TRAF3-204ENST00000539721 FGGP02679 453 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 ZDHHC11BP0C7U3 371 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 LONRF2Q1L5Z9 754 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 ERMARDQ5T6L9 678 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 DNAJB7Q7Z6W7 309 aaPredicted RBP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 CCDC185Q8N715 623 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 TEKT4Q8WW24 435 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 RAPGEF5Q92565 580 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 CASP10Q92851 521 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 SNRNP25Q9BV90 132 aaKnown RBP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 OLA1Q9NTK5 396 aaKnown RBP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 UXTQ9UBK9 157 aaPredicted RBP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 TTC7AQ9ULT0 858 aaPredicted RBP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 CTAGE15A4D2H0 777 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 C1RP00736 705 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 CTAGE8P0CG41 777 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 SMAD3P84022 425 aaKnown RBP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 CLUL1Q15846 466 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 PPM1LQ5SGD2 360 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 MSANTD2Q6P1R3 559 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 CTAGE6Q86UF2 777 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 CTAGE4Q8IX94 777 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 ELMOD1Q8N336 334 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 KCTD6Q8NC69 237 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 NAP1L3Q99457 506 aaPredicted RBP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 PLEKHA4Q9H4M7 779 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 WDR6Q9NNW5 1121 aaKnown RBP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 MAN1C1Q9NR34 630 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAF3-204ENST00000539721 GPATCH2LQ9NWQ4 482 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 TRPM5Q9NZQ8 1165 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 SFMBT1Q9UHJ3 866 aa16.82■□□□□ 0.28
TRAF3-204ENST00000539721 EPOPA6NHQ4 379 aa16.81■□□□□ 0.28
TRAF3-204ENST00000539721 PER2O15055 1255 aa16.81■□□□□ 0.28
TRAF3-204ENST00000539721 MDM4O15151 490 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms