RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 B4GALNT4Q76KP1 1039 aa21.1■□□□□ 0.97
PACSIN3-211ENST00000539589 SPATA18Q8TC71 538 aa21.1■□□□□ 0.97
PACSIN3-211ENST00000539589 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.1■□□□□ 0.97
PACSIN3-211ENST00000539589 RSPH1Q8WYR4 309 aa21.1■□□□□ 0.97
PACSIN3-211ENST00000539589 APBB2Q92870 758 aa21.1■□□□□ 0.97
PACSIN3-211ENST00000539589 PAWRQ96IZ0 340 aaKnown RBP21.1■□□□□ 0.97
PACSIN3-211ENST00000539589 B3GNT5Q9BYG0 378 aa21.1■□□□□ 0.97
PACSIN3-211ENST00000539589 DNAJB4Q9UDY4 337 aa21.1■□□□□ 0.97
PACSIN3-211ENST00000539589 VWA8A3KMH1 1905 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 SCNN1AP37088 669 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 LHX1P48742 406 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 RAB6CQ53S08 254 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 DEFB128Q7Z7B8 93 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 ZNF473Q8WTR7 871 aaKnown RBP21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 CASD1Q96PB1 797 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 HNRNPABQ99729 332 aaKnown RBP21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 RAB6CQ9H0N0 254 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 CYP11A1P05108 521 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 RBP3P10745 1247 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 CHN1P15882 459 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 RPL34P49207 117 aaKnown RBP21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 GDF10P55107 478 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 LRRC26Q2I0M4 334 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 MDH1BQ5I0G3 518 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 CENPUQ71F23 418 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 SLC26A9Q7LBE3 791 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 ARCQ7LC44 396 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 PPIL6Q8IXY8 311 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 URGCPQ8TCY9 931 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 PRCCQ92733 491 aaPredicted RBP21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 P3H4Q92791 437 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 HSFY1Q96LI6 401 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 RNF157Q96PX1 679 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 PCDHB7Q9Y5E2 793 aa21.09■□□□□ 0.97
PACSIN3-211ENST00000539589 MYBPHLA2RUH7 354 aa21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 STIP1P31948 543 aaKnown RBP21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 PTPN9P43378 593 aa21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 CTCFP49711 727 aaPredicted RBP21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 ERMARDQ5T6L9 678 aa21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 VSIG1Q86XK7 387 aa21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 XPO6Q96QU8 1125 aaKnown RBP21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 SYT15Q9BQS2 421 aa21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 C10orf88Q9H8K7 445 aa21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 PCDH10Q9P2E7 1040 aa21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 HCSTQ9UBK5 93 aa21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 FARP1Q9Y4F1 1045 aaPredicted RBP21.08■□□□□ 0.97
PACSIN3-211ENST00000539589 PTPRDP23468 1912 aa21.08■□□□□ 0.96
PACSIN3-211ENST00000539589 A0A087WUV0 522 aaPredicted RBP21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 BEST1O76090 585 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 ODC1P11926 461 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 RPL22P35268 128 aaKnown RBP21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 NOMO1Q15155 1222 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 PKN2Q16513 984 aaKnown RBP21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 SRLQ86TD4 932 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 EXOC3L1Q86VI1 746 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 UNC45BQ8IWX7 931 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 ANKLE1Q8NAG6 615 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 ARHGEF2Q92974 986 aaKnown RBP21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 SUSD3Q96L08 255 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 RRP15Q9Y3B9 282 aaKnown RBP21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 NLRC5Q86WI3 1866 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 SMAPO00193 183 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 MDM4O15151 490 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 ALOX15BO15296 676 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 CDH16O75309 829 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 LCP1P13796 627 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 SLC8A3P57103 927 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 ROR1Q01973 937 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 SPATS2Q86XZ4 545 aaKnown RBP21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 FAM71DQ8N9W8 422 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 PHACTR1Q9C0D0 580 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 KANSL3Q9P2N6 904 aa21.07■□□□□ 0.96
PACSIN3-211ENST00000539589 OR1G1P47890 313 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 HDAC4P56524 1084 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 HIF1AQ16665 826 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 CCDC38Q502W7 563 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 DARS2Q6PI48 645 aaKnown RBP21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 SNRNP25Q9BV90 132 aaKnown RBP21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 DUSP16Q9BY84 665 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 FAM107BQ9H098 131 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 C11orf49Q9H6J7 331 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 NRDE2Q9H7Z3 1164 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 TMEM39AQ9NV64 488 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 INTS9Q9NV88 658 aaKnown RBP21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 LGALS13Q9UHV8 139 aa21.06■□□□□ 0.96
PACSIN3-211ENST00000539589 TGM2P21980 687 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 ITGB8P26012 769 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 RNASELQ05823 741 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 ANKRD20A8PQ5CZ79 823 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 ZC3H12AQ5D1E8 599 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 NPNTQ6UXI9 565 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 RIBC1Q8N443 379 aaPredicted RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 CLEC4CQ8WTT0 213 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 CPT1BQ92523 772 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 PCED1BQ96HM7 432 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 TMEM209Q96SK2 561 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 PCDH18Q9HCL0 1135 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 TMEM30AQ9NV96 361 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 GPATCH2LQ9NWQ4 482 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms