RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
RPAIN-206ENST00000539417 ADGRG2Q8IZP9 1017 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 ZNF687Q8N1G0 1237 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 FBXL6Q8N531 539 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 TMEM35BQ8NCS4 154 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 SLC30A5Q8TAD4 765 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 CSGALNACT1Q8TDX6 532 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 SYT11Q9BT88 431 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 MFSD1Q9H3U5 465 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 ECT2Q9H8V3 914 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 MARCH2Q9P0N8 246 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 KMT2EQ8IZD2 1858 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 SLC12A8A0AV02 714 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 E2F8A0AVK6 867 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 SPECC1L-ADORA2AF8WAN1 911 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 STK25O00506 426 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 GRAP2O75791 330 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 CYP1A1P04798 512 aaPredicted RBP16.48■□□□□ 0.23
RPAIN-206ENST00000539417 GLULP15104 373 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 TARSP26639 723 aaKnown RBP16.48■□□□□ 0.23
RPAIN-206ENST00000539417 CTHP32929 405 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 KPNA1P52294 538 aaPredicted RBP16.48■□□□□ 0.23
RPAIN-206ENST00000539417 PDGFRLQ15198 375 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 ITPRIPL2Q3MIP1 535 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 OR6B2Q6IFH4 312 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 OLFML1Q6UWY5 402 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 PHLDB2Q86SQ0 1253 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 DNAAF5Q86Y56 855 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 FMNL3Q8IVF7 1028 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 ADAM32Q8TC27 787 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 CPLX3Q8WVH0 158 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 FAM149B1Q96BN6 582 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 FBRSL1Q9HCM7 1045 aaKnown RBP16.48■□□□□ 0.23
RPAIN-206ENST00000539417 ABCC13Q9NSE7 274 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 SH3BP1Q9Y3L3 701 aa16.48■□□□□ 0.23
RPAIN-206ENST00000539417 MYOFQ9NZM1 2061 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 ANTXRLA6NF34 631 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 GYPCP04921 128 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 CYP17A1P05093 508 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 DCNP07585 359 aaKnown RBP16.47■□□□□ 0.23
RPAIN-206ENST00000539417 SKILP12757 684 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 NCAM1P13591 858 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 GJA4P35212 333 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 PRKCQQ04759 706 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 FZD5Q13467 585 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 MSANTD2Q6P1R3 559 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 RHBDF2Q6PJF5 856 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 Q6ZNB5 142 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 HTR3DQ70Z44 454 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 ZNF677Q86XU0 584 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 AGPAT1Q99943 283 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 ADAM33Q9BZ11 813 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 RAPGEFL1Q9UHV5 662 aa16.47■□□□□ 0.23
RPAIN-206ENST00000539417 NDRG2Q9UN36 371 aaKnown RBP16.47■□□□□ 0.23
RPAIN-206ENST00000539417 KANSL1LA0AUZ9 987 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 UNGP13051 313 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-206ENST00000539417 FERP16591 822 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 GABRB2P47870 512 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 MESP2Q0VG99 397 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 UBXN2BQ14CS0 331 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 DHCR24Q15392 516 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 FIGNQ5HY92 759 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 ASTLQ6HA08 431 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-206ENST00000539417 TADA2BQ86TJ2 420 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 TAC4Q86UU9 113 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 ERICH1Q86X53 443 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 DDX42Q86XP3 938 aaKnown RBP eCLIP16.46■□□□□ 0.23
RPAIN-206ENST00000539417 XYLT1Q86Y38 959 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 CCDC105Q8IYK2 499 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 DEFB106AQ8N104 65 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 DQX1Q8TE96 717 aaKnown RBP16.46■□□□□ 0.23
RPAIN-206ENST00000539417 RNF139Q8WU17 664 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 FAM3CQ92520 227 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 ATP2A3Q93084 1043 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 LTB4R2Q9NPC1 389 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 TAS2R14Q9NYV8 317 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 CEP83Q9Y592 693 aa16.46■□□□□ 0.23
RPAIN-206ENST00000539417 ZDBF2Q9HCK1 2354 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 FAM170BA6NMN3 283 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 GJB6O95452 261 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 LSM8O95777 96 aaKnown RBP16.45■□□□□ 0.22
RPAIN-206ENST00000539417 AOC1P19801 751 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 AVPR2P30518 371 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 CORO1AP31146 461 aaKnown RBP16.45■□□□□ 0.22
RPAIN-206ENST00000539417 YWHAZP63104 245 aaKnown RBP16.45■□□□□ 0.22
RPAIN-206ENST00000539417 SLC6A3Q01959 620 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 PTP4A2Q12974 167 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 PON2Q15165 354 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 TRIP4Q15650 581 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-206ENST00000539417 ASIC2Q16515 512 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 CLEC16AQ2KHT3 1053 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 LY6G5CQ5SRR4 150 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 TRNP1Q6NT89 227 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 MMS22LQ6ZRQ5 1243 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 ZNF571Q7Z3V5 609 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-206ENST00000539417 C12orf40Q86WS4 652 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 TMEM25Q86YD3 366 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 PJA1Q8NG27 643 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms