RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 DHX40Q8IX18 779 aaKnown RBP8.82□□□□□ -1
SPARC-208ENST00000538026 ETFBKMTQ8IXQ9 262 aa8.82□□□□□ -1
SPARC-208ENST00000538026 FAM71AQ8IYT1 594 aa8.82□□□□□ -1
SPARC-208ENST00000538026 SCML4Q8N228 414 aa8.82□□□□□ -1
SPARC-208ENST00000538026 DDX1Q92499 740 aaKnown RBP8.82□□□□□ -1
SPARC-208ENST00000538026 EDEM1Q92611 657 aa8.82□□□□□ -1
SPARC-208ENST00000538026 ATP2A3Q93084 1043 aa8.82□□□□□ -1
SPARC-208ENST00000538026 MSANTD3Q96H12 275 aa8.82□□□□□ -1
SPARC-208ENST00000538026 PIWIL1Q96J94 861 aaKnown RBP8.82□□□□□ -1
SPARC-208ENST00000538026 SPATA6Q9NWH7 488 aaPredicted RBP8.82□□□□□ -1
SPARC-208ENST00000538026 LIMA1Q9UHB6 759 aaKnown RBP8.82□□□□□ -1
SPARC-208ENST00000538026 DACH1Q9UI36 760 aa8.82□□□□□ -1
SPARC-208ENST00000538026 SIK3Q9Y2K2 1263 aa8.82□□□□□ -1
SPARC-208ENST00000538026 MRPS17Q9Y2R5 130 aaKnown RBP8.82□□□□□ -1
SPARC-208ENST00000538026 SPTBN2O15020 2390 aa8.81□□□□□ -1
SPARC-208ENST00000538026 WDFY3Q8IZQ1 3526 aa8.81□□□□□ -1
SPARC-208ENST00000538026 KNL1Q8NG31 2342 aa8.81□□□□□ -1
SPARC-208ENST00000538026 A0A0A0MRY4 1105 aa8.81□□□□□ -1
SPARC-208ENST00000538026 HNRNPLP14866 589 aaKnown RBP eCLIP8.81□□□□□ -1
SPARC-208ENST00000538026 GNA15P30679 374 aa8.81□□□□□ -1
SPARC-208ENST00000538026 MRE11P49959 708 aa8.81□□□□□ -1
SPARC-208ENST00000538026 COPB1P53618 953 aaKnown RBP8.81□□□□□ -1
SPARC-208ENST00000538026 MFAP3P55082 362 aa8.81□□□□□ -1
SPARC-208ENST00000538026 PITX1P78337 314 aaPredicted RBP8.81□□□□□ -1
SPARC-208ENST00000538026 CSTF1Q05048 431 aaKnown RBP8.81□□□□□ -1
SPARC-208ENST00000538026 EFEMP1Q12805 493 aa8.81□□□□□ -1
SPARC-208ENST00000538026 DRAP1Q14919 205 aaPredicted RBP8.81□□□□□ -1
SPARC-208ENST00000538026 IQCB1Q15051 598 aa8.81□□□□□ -1
SPARC-208ENST00000538026 STX1AQ16623 288 aa8.81□□□□□ -1
SPARC-208ENST00000538026 ANO6Q4KMQ2 910 aa8.81□□□□□ -1
SPARC-208ENST00000538026 EMC10Q5UCC4 262 aa8.81□□□□□ -1
SPARC-208ENST00000538026 CAVIN1Q6NZI2 390 aaKnown RBP8.81□□□□□ -1
SPARC-208ENST00000538026 ENOSF1Q7L5Y1 443 aa8.81□□□□□ -1
SPARC-208ENST00000538026 TMEM110Q86TL2 294 aa8.81□□□□□ -1
SPARC-208ENST00000538026 MIB1Q86YT6 1006 aa8.81□□□□□ -1
SPARC-208ENST00000538026 SCUBE3Q8IX30 993 aa8.81□□□□□ -1
SPARC-208ENST00000538026 CPA6Q8N4T0 437 aa8.81□□□□□ -1
SPARC-208ENST00000538026 NAT16Q8N8M0 369 aa8.81□□□□□ -1
SPARC-208ENST00000538026 ZBTB44Q8NCP5 570 aa8.81□□□□□ -1
SPARC-208ENST00000538026 HSFY1Q96LI6 401 aa8.81□□□□□ -1
SPARC-208ENST00000538026 P2RY13Q9BPV8 354 aa8.81□□□□□ -1
SPARC-208ENST00000538026 LSM14BQ9BX40 385 aaKnown RBP8.81□□□□□ -1
SPARC-208ENST00000538026 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
SPARC-208ENST00000538026 CNGB3Q9NQW8 809 aa8.81□□□□□ -1
SPARC-208ENST00000538026 ANO10Q9NW15 660 aa8.81□□□□□ -1
SPARC-208ENST00000538026 SFMBT1Q9UHJ3 866 aa8.81□□□□□ -1
SPARC-208ENST00000538026 DNMT3LQ9UJW3 386 aa8.81□□□□□ -1
SPARC-208ENST00000538026 FBXO4Q9UKT5 387 aa8.81□□□□□ -1
SPARC-208ENST00000538026 CLEC4EQ9ULY5 219 aa8.81□□□□□ -1
SPARC-208ENST00000538026 ASPMQ8IZT6 3477 aa8.81□□□□□ -1
SPARC-208ENST00000538026 GOLGA6L22H0YM25 854 aa8.8□□□□□ -1
SPARC-208ENST00000538026 NCAM2O15394 837 aa8.8□□□□□ -1
SPARC-208ENST00000538026 TEX33O43247 280 aa8.8□□□□□ -1
SPARC-208ENST00000538026 HOXC11O43248 304 aaPredicted RBP8.8□□□□□ -1
SPARC-208ENST00000538026 MSI1O43347 362 aaKnown RBP8.8□□□□□ -1
SPARC-208ENST00000538026 THAP12O43422 761 aa8.8□□□□□ -1
SPARC-208ENST00000538026 LILRB5O75023 590 aa8.8□□□□□ -1
SPARC-208ENST00000538026 RNF40O75150 1001 aa8.8□□□□□ -1
SPARC-208ENST00000538026 PAPSS2O95340 614 aaPredicted RBP8.8□□□□□ -1
SPARC-208ENST00000538026 NFATC1O95644 943 aa8.8□□□□□ -1
SPARC-208ENST00000538026 HMBSP08397 361 aa8.8□□□□□ -1
SPARC-208ENST00000538026 CISD3P0C7P0 127 aa8.8□□□□□ -1
SPARC-208ENST00000538026 UCHL3P15374 230 aa8.8□□□□□ -1
SPARC-208ENST00000538026 CHRNB2P17787 502 aa8.8□□□□□ -1
SPARC-208ENST00000538026 MAGEA9P43362 315 aa8.8□□□□□ -1
SPARC-208ENST00000538026 PSEN1P49768 467 aa8.8□□□□□ -1
SPARC-208ENST00000538026 JAM2P57087 298 aa8.8□□□□□ -1
SPARC-208ENST00000538026 MYL5Q02045 173 aa8.8□□□□□ -1
SPARC-208ENST00000538026 EIF4EBP2Q13542 120 aaPredicted RBP8.8□□□□□ -1
SPARC-208ENST00000538026 STILQ15468 1287 aa8.8□□□□□ -1
SPARC-208ENST00000538026 TRIP4Q15650 581 aaPredicted RBP8.8□□□□□ -1
SPARC-208ENST00000538026 ZNF528Q3MIS6 628 aa8.8□□□□□ -1
SPARC-208ENST00000538026 DGKKQ5KSL6 1271 aa8.8□□□□□ -1
SPARC-208ENST00000538026 SYPL2Q5VXT5 272 aa8.8□□□□□ -1
SPARC-208ENST00000538026 MSANTD2Q6P1R3 559 aa8.8□□□□□ -1
SPARC-208ENST00000538026 C1orf228Q6PIY5 440 aa8.8□□□□□ -1
SPARC-208ENST00000538026 SASS6Q6UVJ0 657 aa8.8□□□□□ -1
SPARC-208ENST00000538026 TOGARAM2Q6ZUX3 1019 aa8.8□□□□□ -1
SPARC-208ENST00000538026 PASD1Q8IV76 773 aa8.8□□□□□ -1
SPARC-208ENST00000538026 FMNL3Q8IVF7 1028 aa8.8□□□□□ -1
SPARC-208ENST00000538026 FAM114A1Q8IWE2 563 aa8.8□□□□□ -1
SPARC-208ENST00000538026 SPEM1Q8N4L4 309 aa8.8□□□□□ -1
SPARC-208ENST00000538026 AOPEPQ8N6M6 819 aa8.8□□□□□ -1
SPARC-208ENST00000538026 SUMF1Q8NBK3 374 aa8.8□□□□□ -1
SPARC-208ENST00000538026 OLIG1Q8TAK6 271 aa8.8□□□□□ -1
SPARC-208ENST00000538026 STK32AQ8WU08 396 aa8.8□□□□□ -1
SPARC-208ENST00000538026 CD101Q93033 1021 aa8.8□□□□□ -1
SPARC-208ENST00000538026 MYEOVQ96EZ4 313 aa8.8□□□□□ -1
SPARC-208ENST00000538026 CPXM1Q96SM3 734 aa8.8□□□□□ -1
SPARC-208ENST00000538026 MIS12Q9H081 205 aa8.8□□□□□ -1
SPARC-208ENST00000538026 LRRC4Q9HBW1 653 aa8.8□□□□□ -1
SPARC-208ENST00000538026 ZDHHC4Q9NPG8 344 aa8.8□□□□□ -1
SPARC-208ENST00000538026 PLCB1Q9NQ66 1216 aa8.8□□□□□ -1
SPARC-208ENST00000538026 SPHK2Q9NRA0 654 aa8.8□□□□□ -1
SPARC-208ENST00000538026 MARCH2Q9P0N8 246 aa8.8□□□□□ -1
SPARC-208ENST00000538026 CALCOCO1Q9P1Z2 691 aa8.8□□□□□ -1
SPARC-208ENST00000538026 HESX1Q9UBX0 185 aa8.8□□□□□ -1
SPARC-208ENST00000538026 RASAL2Q9UJF2 1139 aa8.8□□□□□ -1
SPARC-208ENST00000538026 FBXO10Q9UK96 956 aa8.8□□□□□ -1
SPARC-208ENST00000538026 AGO1Q9UL18 857 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms