RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 GNASQ5JWF2 1037 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 PIGZQ86VD9 579 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 CCDC185Q8N715 623 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 GSTCDQ8NEC7 633 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 MAGEC3Q8TD91 643 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 FBF1Q8TES7 1133 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 SOCS4Q8WXH5 440 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 RTP4Q96DX8 246 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 NCAPGQ9BPX3 1015 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 CYLDQ9NQC7 956 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 RAB6BQ9NRW1 208 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 SENP1Q9P0U3 644 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 SLC24A2Q9UI40 661 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 AP4E1Q9UPM8 1137 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 CHMP2BQ9UQN3 213 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 CDY2AQ9Y6F7 541 aa13.9□□□□□ -0.18
VPS33B-202ENST00000535906 TRPM7Q96QT4 1865 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 A0A1W2PPM1 405 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 CYB561D2O14569 222 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 XPO1O14980 1071 aaKnown RBP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 AVILO75366 819 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 ASMTLO95671 621 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 PHBP35232 272 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 WDR4P57081 412 aaKnown RBP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 SLC10A2Q12908 348 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 WSCD1Q658N2 575 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 CGB2Q6NT52 195 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 TAF2Q6P1X5 1199 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 CXCL17Q6UXB2 119 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 PAQR9Q6ZVX9 377 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 PALM2Q8IXS6 379 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 C4orf33Q8N1A6 199 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 TOP6BLQ8N6T0 577 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 WNT8BQ93098 351 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 HNRNPABQ99729 332 aaKnown RBP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 PSMC3IPQ9P2W1 217 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 BCLAF3A2AJT9 711 aaKnown RBP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 ZBED1O96006 694 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 RARBP10826 455 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 FOXN2P32314 431 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 ELK3P41970 407 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 MRPS6P82932 125 aaKnown RBP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 GBE1Q04446 702 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 ADIGQ0VDE8 80 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 CRHR2Q13324 411 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 FAXCQ5TGI0 409 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 KIAA0319Q5VV43 1072 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 SAPCD2Q86UD0 394 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 AGGF1Q8N302 714 aaeCLIP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 CCDC33Q8N5R6 958 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 DENND1AQ8TEH3 1009 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 DUSP16Q9BY84 665 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 ACSS3Q9H6R3 686 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.89□□□□□ -0.19
VPS33B-202ENST00000535906 PAK5Q9P286 719 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 GGT7Q9UJ14 662 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 ST3GAL5Q9UNP4 418 aa13.89□□□□□ -0.19
VPS33B-202ENST00000535906 ZNF487B1APH4 448 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 CHADO15335 359 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 PGK1P00558 417 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 PTPN1P18031 435 aaKnown RBP13.88□□□□□ -0.19
VPS33B-202ENST00000535906 MLH1P40692 756 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 MATKP42679 507 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 NDUFV1P49821 464 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 BNIP1Q12981 228 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 NBPF20Q3BBV1 942 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 RNF43Q68DV7 783 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 GDF6Q6KF10 455 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-202ENST00000535906 RGMBQ6NW40 437 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 DEFB106AQ8N104 65 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 PYROXD2Q8N2H3 581 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 FAM149B1Q96BN6 582 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 KCTD15Q96SI1 283 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-202ENST00000535906 PAFAH2Q99487 392 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 PITPNM3Q9BZ71 974 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 TSPYL2Q9H2G4 693 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-202ENST00000535906 RXFP1Q9HBX9 757 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 KLHL14Q9P2G3 628 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 GTF2IRD1Q9UHL9 959 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 SMG5Q9UPR3 1016 aaKnown RBP13.88□□□□□ -0.19
VPS33B-202ENST00000535906 GABRDO14764 452 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 CTSHP09668 335 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 NCALDP61601 193 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 PITX1P78337 314 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-202ENST00000535906 EFHC1Q5JVL4 640 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 ADGRD1Q6QNK2 874 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 FAM131BQ86XD5 332 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 CCDC110Q8TBZ0 833 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 LPPQ93052 612 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 CSPG4P5Q96PW8 444 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 SMC6Q96SB8 1091 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 DHRS4Q9BTZ2 278 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 ZFYVE28Q9HCC9 887 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 FAM105AQ9NUU6 356 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 MIOSQ9NXC5 875 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 FETUBQ9UGM5 382 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 MFHAS1Q9Y4C4 1052 aa13.88□□□□□ -0.19
VPS33B-202ENST00000535906 TEX264Q9Y6I9 313 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms