RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 MTCL1Q9Y4B5 1905 aaKnown RBP12.87□□□□□ -0.35
SCARB1-204ENST00000535005 MYH10P35580 1976 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 A0A0A6YYK5 440 aaPredicted RBP12.86□□□□□ -0.35
SCARB1-204ENST00000535005 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 ABL1P00519 1130 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 LRG1P02750 347 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 ABCB4P21439 1286 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 YWHAQP27348 245 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 USP46P62068 366 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 MRPS5P82675 430 aaKnown RBP12.86□□□□□ -0.35
SCARB1-204ENST00000535005 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 HABP4Q5JVS0 413 aaKnown RBP12.86□□□□□ -0.35
SCARB1-204ENST00000535005 PPP1R15BQ5SWA1 713 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 OR6B2Q6IFH4 312 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 KDM7AQ6ZMT4 941 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 FAM183BPQ6ZVS7 135 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 SLC26A9Q7LBE3 791 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 BHLHA9Q7RTU4 235 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 DNAJB7Q7Z6W7 309 aaPredicted RBP12.86□□□□□ -0.35
SCARB1-204ENST00000535005 MREGQ8N565 214 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 CMASQ8NFW8 434 aaPredicted RBP12.86□□□□□ -0.35
SCARB1-204ENST00000535005 VN1R2Q8NFZ6 395 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCARB1-204ENST00000535005 ARHGEF26Q96DR7 871 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 PARVAQ9NVD7 372 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 SCINQ9Y6U3 715 aa12.86□□□□□ -0.35
SCARB1-204ENST00000535005 SIGLEC16A6NMB1 481 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 PIK3R2O00459 728 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 NCK2O43639 380 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 MTA2O94776 668 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 MAMLD1Q13495 774 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 BEND5Q7L4P6 421 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 EIF1ADQ8N9N8 165 aaKnown RBP12.85□□□□□ -0.35
SCARB1-204ENST00000535005 GPR152Q8TDT2 470 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 OVCA2Q8WZ82 227 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 ALS2CR12Q96Q35 445 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 MRPL47Q9HD33 250 aaKnown RBP12.85□□□□□ -0.35
SCARB1-204ENST00000535005 UVRAGQ9P2Y5 699 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 TMEM59LQ9UK28 342 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 HYOU1Q9Y4L1 999 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 FAM170AA1A519 330 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 USP17L7P0C7H9 530 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 ZDHHC11BP0C7U3 371 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 LIG3P49916 1009 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 HADHBP55084 474 aaKnown RBP12.85□□□□□ -0.35
SCARB1-204ENST00000535005 ADAM15Q13444 863 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 COL19A1Q14993 1142 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 DNAJC24Q6P3W2 148 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 SND1Q7KZF4 910 aaKnown RBP eCLIP12.85□□□□□ -0.356e-10■■■■□ 26.2
SCARB1-204ENST00000535005 TAX1BP1Q86VP1 789 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 MON1AQ86VX9 555 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 RHOT2Q8IXI1 618 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 ELMOD1Q8N336 334 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 CLEC4CQ8WTT0 213 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 RFFLQ8WZ73 363 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 CALR3Q96L12 384 aaKnown RBP12.85□□□□□ -0.35
SCARB1-204ENST00000535005 ZNF512Q96ME7 567 aaPredicted RBP12.85□□□□□ -0.35
SCARB1-204ENST00000535005 GAS2L1Q99501 681 aaPredicted RBP12.85□□□□□ -0.35
SCARB1-204ENST00000535005 LRRC3Q9BY71 257 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 PRKD2Q9BZL6 878 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 STIM2Q9P246 746 aa12.85□□□□□ -0.35
SCARB1-204ENST00000535005 UXTQ9UBK9 157 aaPredicted RBP12.85□□□□□ -0.35
SCARB1-204ENST00000535005 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
SCARB1-204ENST00000535005 YJEFN3A6XGL0 299 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 E7ENQ6 273 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 ENC1O14682 589 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 XYLBO75191 536 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 RFPL2O75678 378 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 KRT3P12035 628 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 PPP3CCP48454 512 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 PSEN1P49768 467 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 MNAT1P51948 309 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 EPHA5P54756 1037 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 TAF12Q16514 161 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 CTC1Q2NKJ3 1217 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 SNX30Q5VWJ9 437 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 LLGL2Q6P1M3 1020 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 SCD5Q86SK9 330 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 CREG2Q8IUH2 290 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 OTUD6BQ8N6M0 293 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 PDZD8Q8NEN9 1154 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 FEZF2Q8TBJ5 459 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 FBXO32Q969P5 355 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 ZNF707Q96C28 371 aaPredicted RBP12.84□□□□□ -0.35
SCARB1-204ENST00000535005 PIWIL1Q96J94 861 aaKnown RBP12.84□□□□□ -0.35
SCARB1-204ENST00000535005 SLITRK1Q96PX8 696 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 TRIM62Q9BVG3 475 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 IGFLR1Q9H665 355 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 TRIM10Q9UDY6 481 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 TFR2Q9UP52 801 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 GREB1Q4ZG55 1949 aa12.84□□□□□ -0.35
SCARB1-204ENST00000535005 TMEM191CA6NGB0 347 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 GOLGA8SH3BPF8 625 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 NDUFAB1O14561 156 aa12.83□□□□□ -0.35
SCARB1-204ENST00000535005 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.35
SCARB1-204ENST00000535005 GLP2RO95838 553 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms