RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 CRNNQ9UBG3 495 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 HEATR9A2RTY3 570 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 USP17L12C9JPN9 530 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 USP17L21D6R901 530 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 H7C0S8 307 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 MYO1DO94832 1006 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ZNF157P51786 506 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 GALCP54803 685 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 KCNQ4P56696 695 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 EIF3EP60228 445 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 CARTPTQ16568 116 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 SCARA3Q6AZY7 606 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 PGBD2Q6P3X8 592 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 CATSPER4Q7RTX7 472 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 OOSP2Q86WS3 158 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TDRD5Q8NAT2 981 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ARRDC4Q8NCT1 418 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 SEMA6AQ9H2E6 1030 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ARMCX1Q9P291 453 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 VPS4AQ9UN37 437 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 MYH1P12882 1939 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 PEX14O75381 377 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 PARNO95453 639 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 BTDP43251 543 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 BCAR1P56945 870 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 BNIP1Q12981 228 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 MTFR1Q15390 333 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 USP17L2Q6R6M4 530 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 SMAD5Q99717 465 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ALDH8A1Q9H2A2 487 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 CLK4Q9HAZ1 481 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TRMT13Q9NUP7 481 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 VAV3Q9UKW4 847 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 CCDC88AQ3V6T2 1871 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ZBTB11O95625 1053 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 IFI30P13284 250 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 COILP38432 576 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 CDK7P50613 346 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TMEM132BQ14DG7 1078 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 DLG3Q92796 817 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TSEN34Q9BSV6 310 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ISCA1Q9BUE6 129 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TOPAZ1Q8N9V7 1692 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 PDS5AQ29RF7 1337 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 FRMPD2Q68DX3 1309 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 C15orf38-AP3S2A0A0A6YYH1 394 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 FAM92AA1XBS5 289 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 E9PBE3 544 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 RTN2O75298 545 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 NADKO95544 446 aaPredicted RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 PABPC1P11940 636 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 UQCRBP14927 111 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 MRPS22P82650 360 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 POU5F1Q01860 360 aaKnown RBP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 LRRC74AQ0VAA2 488 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 GRSF1Q12849 480 aaKnown RBP eCLIP8.07□□□□□ -1.12
CSRP1-218ENST00000533402 TIMM50Q3ZCQ8 353 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 MROH9Q5TGP6 573 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 ARPINQ7Z6K5 226 aa8.07□□□□□ -1.12
CSRP1-218ENST00000533402 MAGEA2P43356 314 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 AP1S2P56377 157 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 EDRF1Q3B7T1 1238 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 EIF3MQ7L2H7 374 aaKnown RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 CDKL3Q8IVW4 592 aaPredicted RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 SP8Q8IXZ3 490 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 NFKBIL1Q9UBC1 381 aaPredicted RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 ZHX2Q9Y6X8 837 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 MMP10P09238 476 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 RALAP11233 206 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 SKIV2L2P42285 1042 aaKnown RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 MTA1Q13330 715 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 PWP1Q13610 501 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 ABRAXAS1Q6UWZ7 409 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 SAPCD2Q86UD0 394 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 SETD9Q8NE22 299 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 PIK3C3Q8NEB9 887 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 SCFD1Q8WVM8 642 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 CDC42EP4Q9H3Q1 356 aaKnown RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 PCSK1NQ9UHG2 260 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 CROTQ9UKG9 612 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 SYNCRIPO60506 623 aaKnown RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 FARP2O94887 1054 aaPredicted RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 ITGA2BP08514 1039 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 TKTP29401 623 aaKnown RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 MAGEA10P43363 369 aaPredicted RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 XIAPP98170 497 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 PKN2Q16513 984 aaKnown RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 SLC45A4Q5BKX6 768 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 USPL1Q5W0Q7 1092 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 TMEM53Q6P2H8 277 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 HES6Q96HZ4 224 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 EPB41L1Q9H4G0 881 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 ACAD9Q9H845 621 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 AASDHPPTQ9NRN7 309 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 CNOT7Q9UIV1 285 aaKnown RBP8.06□□□□□ -1.12
CSRP1-218ENST00000533402 BIRC5O15392 142 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 RARBP10826 455 aa8.06□□□□□ -1.12
CSRP1-218ENST00000533402 FGFR3P22607 806 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms