RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GAB4Q2WGN9 574 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 WDR45BQ5MNZ6 344 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 EMC10Q5UCC4 262 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 C9orf57Q5W0N0 161 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 SLC39A4Q6P5W5 647 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 ARL14EPQ8N8R7 260 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-213ENST00000533149 TMEM174Q8WUU8 243 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 FOXJ1Q92949 421 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 ZNF419Q96HQ0 510 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-213ENST00000533149 PDLIM2Q96JY6 352 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 CBWD1Q9BRT8 395 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 CALCOCO1Q9P1Z2 691 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 IGHV1OR15-9A0A0B4J2B8 117 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 PIRO00625 290 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 CYB561D2O14569 222 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 TEX33O43247 280 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 EXOC3O60645 756 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 NDUFS2O75306 463 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 CYP17A1P05093 508 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 TPM3P06753 285 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 NFICP08651 508 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 EPB41P11171 864 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 HLA-EP13747 358 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 PFKLP17858 780 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 GABRG2P18507 467 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 CDC25BP30305 580 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 PSMC2P35998 433 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 SLC6A11P48066 632 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 GPR15P49685 360 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 LIG4P49917 911 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 MARSP56192 900 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 TSPY1Q01534 308 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 CFHR1Q03591 330 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 PREPLQ4J6C6 727 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 SLFN12LQ6IEE8 588 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 IL27RAQ6UWB1 636 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 CD302Q8IX05 232 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 DRC7Q8IY82 874 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 ADGRG2Q8IZP9 1017 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 XXYLT1Q8NBI6 393 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 FCRL3Q96P31 734 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 RPF1Q9H9Y2 349 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 ARHGEF4Q9NR80 690 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 INTS13Q9NVM9 706 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 TOR4AQ9NXH8 423 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 HSPBP1Q9NZL4 362 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 OBSL1O75147 1896 aa11.99□□□□□ -0.49
TRAPPC4-213ENST00000533149 CEP192Q8TEP8 1941 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 CELSR3Q9NYQ7 3312 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 TEX51A0A1B0GUA7 166 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 GOLGA8IPA6NC78 632 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 C2orf78A6NCI8 922 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 GOLGA8JA6NMD2 632 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 HNRNPDLO14979 420 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 SLC16A3O15427 465 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 FLRT2O43155 660 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 RRP8O43159 456 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 ARHGAP6O43182 974 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 CER1O95813 267 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 ADH1CP00326 375 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 ADRB2P07550 413 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 TPM2P07951 284 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 ATXN1LP0C7T5 689 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 GARTP22102 1010 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 TNFSF9P41273 254 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 DHCR24Q15392 516 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 MAN2A1Q16706 1144 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 VWA3BQ502W6 1294 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 SDHAF4Q5VUM1 108 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 WSCD1Q658N2 575 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 NUDT18Q6ZVK8 323 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 SFTPA1Q8IWL2 248 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 TRIM59Q8IWR1 403 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 RDH13Q8NBN7 331 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 SPC24Q8NBT2 197 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 STKLD1Q8NE28 680 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 ZSWIM2Q8NEG5 633 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 BAHD1Q8TBE0 780 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 RHBDD1Q8TEB9 315 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 POMGNT1Q8WZA1 660 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 CLMPQ9H6B4 373 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 METTL14Q9HCE5 456 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 ARMCX3Q9UH62 379 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 STYXL1Q9Y6J8 313 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 NAV2Q8IVL1 2488 aa11.98□□□□□ -0.49
TRAPPC4-213ENST00000533149 TSC2P49815 1807 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 A0A1B0GTW7 788 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 ANO9A1A5B4 782 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 LGALS16A8MUM7 142 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 LEFTY2O00292 366 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 PES1O00541 588 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 HOXB2P14652 356 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 ITPKBP27987 946 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 EIF2S3P41091 472 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 TAF6P49848 677 aa11.97□□□□□ -0.49
TRAPPC4-213ENST00000533149 UBXN1Q04323 297 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms