RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 SATL1Q86VE3 508 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 MMGT1Q8N4V1 131 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 XXYLT1Q8NBI6 393 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 KRT35Q92764 455 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 CEP95Q96GE4 821 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 GMIPQ9P107 970 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 RCOR1Q9UKL0 485 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 BIRC5O15392 142 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 TEX33O43247 280 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 OXSR1O95747 527 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 IFNAR1P17181 557 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 NPR2P20594 1047 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 MAGP20916 626 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 FGFR2P21802 821 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 RTP1P59025 263 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF45Q02386 682 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 VAC14Q08AM6 782 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ALX1Q15699 326 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 EPC2Q52LR7 807 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 GPR107Q5VW38 600 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ANKS3Q6ZW76 656 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 CCNJLQ8IV13 435 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 SLC7A5P1Q8MH63 180 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 TAGAPQ8N103 731 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ART5Q96L15 291 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 MAGEB18Q96M61 343 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 SPATA16Q9BXB7 569 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 CCDC177Q9NQR7 707 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 SH3GLB2Q9NR46 395 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 DAGLAQ9Y4D2 1042 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 NPHP3-ACAD11A0A0J9YXS1 232 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 TRAPPC3O43617 180 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 SSX5O60225 188 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 MYO1DO94832 1006 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 TFRCP02786 760 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 NR3C1P04150 777 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 PSMB9P28065 219 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 GNA15P30679 374 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 HOXA10P31260 410 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 FXNQ16595 210 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 PABPC1LQ4VXU2 614 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 POLNQ7Z5Q5 900 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 FBXO33Q7Z6M2 555 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ARHGEF19Q8IW93 802 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 CCNYL1Q8N7R7 359 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 OR6P1Q8NGX9 317 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 S100ZQ8WXG8 99 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 DHX35Q9H5Z1 703 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 EPS8L2Q9H6S3 715 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 FANCFQ9NPI8 374 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 USE1Q9NZ43 259 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 PTTG2Q9NZH5 202 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ING4Q9UNL4 249 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 NEDD4P46934 1319 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 NFAT5O94916 1531 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 FAM187AA6NFU0 413 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 TRPC5OSA6NMA1 111 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ZSCAN9O15535 394 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 PSIP1O75475 530 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 IL32P24001 234 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 DLG4P78352 724 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF267Q14586 743 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ZSWIM7Q19AV6 140 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 KLHL38Q2WGJ6 581 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ALFQ53S48 1182 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 OR6Y1Q8NGX8 325 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 MNTQ99583 582 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 TRIM54Q9BYV2 358 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ING3Q9NXR8 418 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 TUBGCP4Q9UGJ1 667 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ZC3H7BQ9UGR2 993 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 LSM7Q9UK45 103 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 PPP2R3BQ9Y5P8 575 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 POTECB2RU33 542 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 DYNC1LI2O43237 492 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 CBX6O95503 412 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 FDX1P10109 184 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ARL4CP56559 192 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 TMEM62Q0P6H9 643 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 NFIAQ12857 509 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF211Q13398 564 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 HEATR6Q6AI08 1181 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 GALNT7Q86SF2 657 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 CASKIN2Q8WXE0 1202 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 C8orf48Q96LL4 319 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 SEPT5Q99719 369 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 DCP1AQ9NPI6 582 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 PCDHGA10Q9Y5H3 936 aa7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 POLR1AO95602 1720 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-210ENST00000533089 SLIT2O94813 1529 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 C2orf74A8MZ97 194 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 TPST1O60507 370 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 SEC24AO95486 1093 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 THEGLP0DJG4 465 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 LIFRP42702 1097 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 COX10Q12887 443 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 XRCC4Q13426 336 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 SCARF1Q14162 830 aa7.16□□□□□ -1.26
TGFBR3-210ENST00000533089 TFDP2Q14188 446 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms