RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RAB20Q9NX57 234 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 WDR35Q9P2L0 1181 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 ZBTB24O43167 697 aaPredicted RBP18.75■□□□□ 0.59
PCF11-206ENST00000533018 RALAP11233 206 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 PLA2G4AP47712 749 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 KIF11P52732 1056 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 BYSLQ13895 437 aaKnown RBP18.75■□□□□ 0.59
PCF11-206ENST00000533018 ZCWPW2Q504Y3 356 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 SDE2Q6IQ49 451 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 ARMCX6Q7L4S7 300 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 TMEFF1Q8IYR6 380 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 FRMD1Q8N878 549 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 FBXL13Q8NEE6 735 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 OLIG1Q8TAK6 271 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 KCNV2Q8TDN2 545 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 ERLEC1Q96DZ1 483 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 TSG101Q99816 390 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 CISHQ9NSE2 258 aa18.75■□□□□ 0.59
PCF11-206ENST00000533018 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.75■□□□□ 0.59
PCF11-206ENST00000533018 C4orf47A7E2U8 309 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 HOXB2P14652 356 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 P2RY2P41231 377 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 PSEN1P49768 467 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 SLC8A3P57103 927 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 KLHDC10Q6PID8 442 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 CHPFQ8IZ52 775 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 TTC39CQ8N584 583 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 TMEM176AQ96HP8 235 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 PLK2Q9NYY3 685 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 RASAL2Q9UJF2 1139 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 CEP192Q8TEP8 1941 aa18.74■□□□□ 0.59
PCF11-206ENST00000533018 CACNA1BQ00975 2339 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 PI4KAP42356 2102 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 LNP1A1A4G5 178 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 PATE3B3GLJ2 98 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 TM4SF5O14894 197 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 GREM1O60565 184 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 HMBSP08397 361 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 CHRM1P11229 460 aaPredicted RBP18.73■□□□□ 0.59
PCF11-206ENST00000533018 NTSR1P30989 418 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 PRCPP42785 496 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 DGKGP49619 791 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 N4BP2L1Q5TBK1 243 aaPredicted RBP18.73■□□□□ 0.59
PCF11-206ENST00000533018 RSRC2Q7L4I2 434 aaKnown RBP18.73■□□□□ 0.59
PCF11-206ENST00000533018 CCDC186Q7Z3E2 898 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 SCD5Q86SK9 330 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 TATDN2Q93075 761 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 CDK5RAP1Q96SZ6 601 aaKnown RBP18.73■□□□□ 0.59
PCF11-206ENST00000533018 ARID3AQ99856 593 aa18.73■□□□□ 0.59
PCF11-206ENST00000533018 LSM14BQ9BX40 385 aaKnown RBP18.73■□□□□ 0.59
PCF11-206ENST00000533018 CACNG3O60359 315 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 EFEMP1Q12805 493 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 ZNF658Q5TYW1 1059 aaPredicted RBP18.72■□□□□ 0.59
PCF11-206ENST00000533018 DAB2IPQ5VWQ8 1189 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 EGFLAMQ63HQ2 1017 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 TOGARAM2Q6ZUX3 1019 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 FMR1NBQ8N0W7 255 aaPredicted RBP18.72■□□□□ 0.59
PCF11-206ENST00000533018 SLC4A11Q8NBS3 891 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 ERCC4Q92889 916 aaPredicted RBP18.72■□□□□ 0.59
PCF11-206ENST00000533018 FAXDC2Q96IV6 333 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 MARK1Q9P0L2 795 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 STARD13Q9Y3M8 1113 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 USP3Q9Y6I4 520 aa18.72■□□□□ 0.59
PCF11-206ENST00000533018 STC2O76061 302 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 KCNK5O95279 499 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 SMC2O95347 1197 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 PTGER3P43115 390 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 RAD23BP54727 409 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 IRX4P78413 519 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 COG7P83436 770 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 MAP7D1Q3KQU3 841 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 ANKRD40Q6AI12 368 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 PSAPL1Q6NUJ1 521 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 DEFB119Q8N690 84 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 GSDMAQ96QA5 445 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 ACOX2Q99424 681 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 TMEM9BQ9NQ34 198 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 CLIC5Q9NZA1 410 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 MBD1Q9UIS9 605 aaPredicted RBP18.71■□□□□ 0.59
PCF11-206ENST00000533018 ZNF510Q9Y2H8 683 aa18.71■□□□□ 0.59
PCF11-206ENST00000533018 MAP1BP46821 2468 aaKnown RBP18.71■□□□□ 0.58
PCF11-206ENST00000533018 PLXND1Q9Y4D7 1925 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 PRRT4C9JH25 899 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 SLC16A3O15427 465 aaKnown RBP18.7■□□□□ 0.58
PCF11-206ENST00000533018 AP5Z1O43299 807 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 GABRG2P18507 467 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 CORO1AP31146 461 aaKnown RBP18.7■□□□□ 0.58
PCF11-206ENST00000533018 FKBP3Q00688 224 aaKnown RBP18.7■□□□□ 0.58
PCF11-206ENST00000533018 RPL6Q02878 288 aaKnown RBP18.7■□□□□ 0.58
PCF11-206ENST00000533018 UAP1L1Q3KQV9 507 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 CBWD6Q4V339 395 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 TRIM61Q5EBN2 209 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 CBWD3Q5JTY5 395 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 CBWD5Q5RIA9 395 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 LYSMD4Q5XG99 296 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 Q6ZNB5 142 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 PIGZQ86VD9 579 aa18.7■□□□□ 0.58
PCF11-206ENST00000533018 ARHGAP18Q8N392 663 aa18.7■□□□□ 0.58
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