RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 RNF139Q8WU17 664 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 GOLGA1Q92805 767 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 FAM149B1Q96BN6 582 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 C18orf8Q96DM3 657 aa25.97■■□□□ 1.75
USP48-214ENST00000532737 SEPT11Q9NVA2 429 aaKnown RBP25.97■■□□□ 1.75
USP48-214ENST00000532737 SCAMP3O14828 347 aaKnown RBP25.96■■□□□ 1.75
USP48-214ENST00000532737 IRF1P10914 325 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 TNFAIP3P21580 790 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 TRIM14Q14142 442 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 HGSNATQ68CP4 663 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 CC2D1AQ6P1N0 951 aaPredicted RBP25.96■■□□□ 1.75
USP48-214ENST00000532737 OLFML1Q6UWY5 402 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 TRIM67Q6ZTA4 783 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 DDX42Q86XP3 938 aaKnown RBP eCLIP25.96■■□□□ 1.75
USP48-214ENST00000532737 IRF7Q92985 503 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 FAM83CQ9BQN1 747 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 OLA1Q9NTK5 396 aaKnown RBP25.96■■□□□ 1.75
USP48-214ENST00000532737 MARCH2Q9P0N8 246 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 NAALADL1Q9UQQ1 740 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 WNT6Q9Y6F9 365 aa25.96■■□□□ 1.75
USP48-214ENST00000532737 MMP8P22894 467 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 YWHAZP63104 245 aaKnown RBP25.95■■□□□ 1.74
USP48-214ENST00000532737 PFKPQ01813 784 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 SLC6A3Q01959 620 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 SIGLEC14Q08ET2 396 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 MSANTD2Q6P1R3 559 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 MMS22LQ6ZRQ5 1243 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 TMC6Q7Z403 805 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 XYLT1Q86Y38 959 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 LINC00597Q9H2U6 94 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 WNT16Q9UBV4 365 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 SFMBT1Q9UHJ3 866 aa25.95■■□□□ 1.74
USP48-214ENST00000532737 TMEM221A6NGB7 291 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 M0R296 226 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 NCAM1P13591 858 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 CENPCQ03188 943 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 TNK2Q07912 1038 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 GOLGA8FQ08AF8 430 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 GOLGA8DPQ0D2H9 430 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 TBX2Q13207 712 aaPredicted RBP25.94■■□□□ 1.74
USP48-214ENST00000532737 EFHC1Q5JVL4 640 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 SYPL2Q5VXT5 272 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 TRIM68Q6AZZ1 485 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 BEND5Q7L4P6 421 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 ZDHHC17Q8IUH5 632 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 MSANTD4Q8NCY6 345 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 OSCP1Q8WVF1 389 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 DNASE1L2Q92874 299 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 TRPV5Q9NQA5 729 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 ASNSD1Q9NWL6 643 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 DUS2Q9NX74 493 aaKnown RBP25.94■■□□□ 1.74
USP48-214ENST00000532737 FBXL21Q9UKT6 434 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 STRIP2Q9ULQ0 834 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 CA14Q9ULX7 337 aa25.94■■□□□ 1.74
USP48-214ENST00000532737 SLC12A8A0AV02 714 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 E2F8A0AVK6 867 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 DDX3XO00571 662 aaKnown RBP eCLIP25.93■■□□□ 1.749e-15■■■■□ 19.8
USP48-214ENST00000532737 GREM1O60565 184 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 GRAP2O75791 330 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 GLI1P08151 1106 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 ARSAP15289 507 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 NSFP46459 744 aaKnown RBP25.93■■□□□ 1.74
USP48-214ENST00000532737 PTP4A2Q12974 167 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 TOGARAM2Q6ZUX3 1019 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 SLC26A9Q7LBE3 791 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 PHF13Q86YI8 300 aaPredicted RBP25.93■■□□□ 1.74
USP48-214ENST00000532737 MRFAP1L1Q96HT8 127 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 C11orf70Q9BRQ4 267 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 POPDC2Q9HBU9 364 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 HPS4Q9NQG7 708 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 SH3BP1Q9Y3L3 701 aa25.93■■□□□ 1.74
USP48-214ENST00000532737 KRBA1A5PL33 1030 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 STC2O76061 302 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 SERPING1P05155 500 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 HMBSP08397 361 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 HNRNPH3P31942 346 aaKnown RBP25.92■■□□□ 1.74
USP48-214ENST00000532737 IFNAR2P48551 515 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 MRE11P49959 708 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 COG7P83436 770 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 PDGFRLQ15198 375 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 SLC44A4Q53GD3 710 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 ACAD10Q6JQN1 1059 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 PHLDB2Q86SQ0 1253 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 DEFB106AQ8N104 65 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 KIAA1958Q8N8K9 716 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 TTC8Q8TAM2 541 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 DQX1Q8TE96 717 aaKnown RBP25.92■■□□□ 1.74
USP48-214ENST00000532737 SLC2A13Q96QE2 648 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 TRIM62Q9BVG3 475 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 EBF3Q9H4W6 596 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 TAS2R14Q9NYV8 317 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 GTSE1Q9NYZ3 720 aa25.92■■□□□ 1.74
USP48-214ENST00000532737 HELZP42694 1942 aaKnown RBP25.91■■□□□ 1.74
USP48-214ENST00000532737 GOLGA8SH3BPF8 625 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 CAPN9O14815 690 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 MSI1O43347 362 aaKnown RBP25.91■■□□□ 1.74
USP48-214ENST00000532737 HSF2BPO75031 334 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 PLEKP08567 350 aaPredicted RBP25.91■■□□□ 1.74
USP48-214ENST00000532737 ARID5BQ14865 1188 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 EML3Q32P44 896 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms