RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 SATB2Q9UPW6 733 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 PRELID1Q9Y255 219 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 NR2E3Q9Y5X4 410 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 CARMIL1Q5VZK9 1371 aa6.03□□□□□ -1.44
CD44-231ENST00000531110 FYCO1Q9BQS8 1478 aa6.02□□□□□ -1.44
CD44-231ENST00000531110 ATAD2BQ9ULI0 1458 aa6.02□□□□□ -1.44
CD44-231ENST00000531110 A0A1W2PS29 197 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 GTPBP10A4D1E9 387 aaKnown RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 CCDC151A5D8V7 595 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 LRRIQ3A6PVS8 624 aaPredicted RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 EFCAB8A8MWE9 144 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 E7ENX8 843 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 FAM227AF5H4B4 570 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 EBAG9O00559 213 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CPLX1O14810 134 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 B3GALT2O43825 422 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 UBXN7O94888 489 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 AGFG2O95081 481 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 PRSS23O95084 383 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 MBD4O95243 580 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 MATN4O95460 622 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CAVIN2O95810 425 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 GPANK1O95872 356 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 FGAP02671 866 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ELANEP08246 267 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ADH4P08319 380 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 RARBP10826 455 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 OAS2P29728 719 aaKnown RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 KRT9P35527 623 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 TSPAN7P41732 249 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CASP2P42575 452 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 GDF5P43026 501 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 PTTG1IPP53801 180 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 PMS2P54278 862 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CXADRP78310 365 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 GPSM2P81274 684 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 AKAP17AQ02040 695 aaKnown RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 TAP2Q03519 686 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 SNX1Q13596 522 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 DPYSQ14117 519 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 PLS1Q14651 629 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 KCNB1Q14721 858 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 BRD3Q15059 726 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 SGSM1Q2NKQ1 1148 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ANO6Q4KMQ2 910 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 B3GNTL1Q67FW5 361 aaPredicted RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 C8orf74Q6P047 294 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 NCCRP1Q6ZVX7 275 aaPredicted RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 ULK2Q8IYT8 1036 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CEP57L1Q8IYX8 460 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CAMKK1Q8N5S9 505 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CPEB3Q8NE35 698 aaKnown RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 FAM71BQ8TC56 605 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 BRIX1Q8TDN6 353 aaKnown RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 ANKRD49Q8WVL7 239 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ZFPM2Q8WW38 1151 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ATRIPQ8WXE1 791 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 IFT81Q8WYA0 676 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 KAT2BQ92831 832 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 SLC35A4Q96G79 324 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 KLHL32Q96NJ5 620 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ACO2Q99798 780 aaKnown RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 FAM167BQ9BTA0 163 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 TEX101Q9BY14 249 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 NACAP1Q9BZK3 213 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 SLC7A5P2Q9GIP4 190 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 GOLPH3LQ9H4A5 285 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ZHX3Q9H4I2 956 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 MMRN2Q9H8L6 949 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ACTR5Q9H9F9 607 aaPredicted RBP6.02□□□□□ -1.45
CD44-231ENST00000531110 EBF2Q9HAK2 575 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 GALNT9Q9HCQ5 603 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 SLC2A4RGQ9NR83 387 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 TBCCD1Q9NVR7 557 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 IL1RAPL1Q9NZN1 696 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CTNNAL1Q9UBT7 734 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 HESX1Q9UBX0 185 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 ZNF69Q9UC07 566 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 STK39Q9UEW8 545 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 STAP2Q9UGK3 403 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 CLASP1Q7Z460 1538 aa6.02□□□□□ -1.45
CD44-231ENST00000531110 HNRNPCL2B2RXH8 293 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 E9PMD0 336 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 TSPAN1O60635 241 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 CTNND1O60716 968 aaKnown RBP6.01□□□□□ -1.45
CD44-231ENST00000531110 HNRNPCL1O60812 293 aaKnown RBP6.01□□□□□ -1.45
CD44-231ENST00000531110 SMIM24O75264 130 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 ERN1O75460 977 aaKnown RBP6.01□□□□□ -1.45
CD44-231ENST00000531110 TUSC2O75896 110 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 RASSF9O75901 435 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 NDUFA10O95299 355 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 YEATS4O95619 227 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 S100A6P06703 90 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 GJB1P08034 283 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 PARP1P09874 1014 aaKnown RBP6.01□□□□□ -1.45
CD44-231ENST00000531110 HSPA1AP0DMV8 641 aaKnown RBP6.01□□□□□ -1.45
CD44-231ENST00000531110 HSPA1BP0DMV9 641 aaKnown RBP6.01□□□□□ -1.45
CD44-231ENST00000531110 FCER1AP12319 257 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 IL4RP24394 825 aa6.01□□□□□ -1.45
CD44-231ENST00000531110 HTR1BP28222 390 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms