RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CUL2Q13617 745 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 E2F5Q15329 346 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 RAB41Q5JT25 222 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 GRAMD4Q6IC98 578 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 ANO7Q6IWH7 933 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 SCD5Q86SK9 330 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 NAT16Q8N8M0 369 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 MDGA1Q8NFP4 955 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 OLIG1Q8TAK6 271 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 TATDN2Q93075 761 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 SLC35C1Q96A29 364 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 JAKMIP2Q96AA8 810 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 BBS2Q9BXC9 721 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 HELZP42694 1942 aaKnown RBP14.92□□□□□ -0.02
CAPN1-212ENST00000527887 BCLAF3A2AJT9 711 aaKnown RBP14.91□□□□□ -0.02
CAPN1-212ENST00000527887 SGK1O00141 431 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 P4HA2O15460 535 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 ZBTB24O43167 697 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-212ENST00000527887 MBD3O95983 291 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 TYRP14679 529 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 GBP1P32455 592 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 DPP6P42658 865 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 KDSRQ06136 332 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 MESP2Q0VG99 397 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 SGO2Q562F6 1265 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 PMS2CLQ68D20 193 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 IL31Q6EBC2 164 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 PM20D1Q6GTS8 502 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 SDE2Q6IQ49 451 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 TMEM92Q6UXU6 159 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 Q6ZNB5 142 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 PIGZQ86VD9 579 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 ZNF513Q8N8E2 541 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-212ENST00000527887 WBP2Q969T9 261 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 SPACA7Q96KW9 195 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 DNAJC17Q9NVM6 304 aaKnown RBP14.91□□□□□ -0.02
CAPN1-212ENST00000527887 HESX1Q9UBX0 185 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
CAPN1-212ENST00000527887 BICDL2A1A5D9 508 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 DCDC2BA2VCK2 349 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 NEDD8-MDP1E9PL57 170 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 XPO1O14980 1071 aaKnown RBP14.9□□□□□ -0.02
CAPN1-212ENST00000527887 DCLK1O15075 740 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 NPC1O15118 1278 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 GDF9O60383 454 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 STC2O76061 302 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 CAVIN2O95810 425 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 ZBED1O96006 694 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 VDRP11473 427 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 NTSR1P30989 418 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 P2RY2P41231 377 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 PMS1P54277 932 aaKnown RBP14.9□□□□□ -0.02
CAPN1-212ENST00000527887 BCAT1P54687 386 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 SF3A2Q15428 464 aaKnown RBP14.9□□□□□ -0.02
CAPN1-212ENST00000527887 KLHL40Q2TBA0 621 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 C10orf76Q5T2E6 689 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 EMC10Q5UCC4 262 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 ARID3AQ99856 593 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 OLA1Q9NTK5 396 aaKnown RBP14.9□□□□□ -0.02
CAPN1-212ENST00000527887 FBXO10Q9UK96 956 aa14.9□□□□□ -0.02
CAPN1-212ENST00000527887 GFRA2O00451 464 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 ADAM23O75077 832 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 GNA14O95837 355 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 PAEPP09466 180 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 SETSIPP0DME0 302 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 FMO5P49326 533 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 DGKGP49619 791 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 TKTL1P51854 596 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 ZNF132P52740 706 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 YWHAGP61981 247 aaKnown RBP eCLIP14.89□□□□□ -0.03
CAPN1-212ENST00000527887 UBE2HP62256 183 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 CREB5Q02930 508 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 BST2Q10589 180 aaKnown RBP14.89□□□□□ -0.03
CAPN1-212ENST00000527887 STILQ15468 1287 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 TPGS1Q6ZTW0 290 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 RSRC2Q7L4I2 434 aaKnown RBP14.89□□□□□ -0.03
CAPN1-212ENST00000527887 LPCAT2Q7L5N7 544 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 MIB1Q86YT6 1006 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 SFTPA1Q8IWL2 248 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 SCML4Q8N228 414 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 KCTD13Q8WZ19 329 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 TPSD1Q9BZJ3 242 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 LRRC4Q9HBW1 653 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 BCCIPQ9P287 314 aaKnown RBP eCLIP14.89□□□□□ -0.03
CAPN1-212ENST00000527887 MAN1B1Q9UKM7 699 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 TSPAN16Q9UKR8 245 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 SLC27A6Q9Y2P4 619 aa14.89□□□□□ -0.03
CAPN1-212ENST00000527887 TRIM49BA6NDI0 452 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 CYBBP04839 570 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 CISD3P0C7P0 127 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 HNRNPLP14866 589 aaKnown RBP eCLIP14.88□□□□□ -0.03
CAPN1-212ENST00000527887 EFEMP1Q12805 493 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 CCDC40Q4G0X9 1142 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 STPG1Q5TH74 334 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 TTC30AQ86WT1 665 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 CPXM2Q8N436 756 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 ERCC4Q92889 916 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-212ENST00000527887 PLD4Q96BZ4 506 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 NT5C1BQ96P26 610 aa14.88□□□□□ -0.03
CAPN1-212ENST00000527887 MARCH2Q9P0N8 246 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms