RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-208	ENST00000527265	THEGL	P0DJG4	465 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	STMN1	P16949	149 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ATP5F1	P24539	256 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PSMA4	P25789	261 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	EPHA8	P29322	1005 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	HPD	P32754	393 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	EIF2D	P41214	584 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PAFAH1B1	P43034	410 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SLC11A2	P49281	568 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	HARS2	P49590	506 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CTXN1	P60606	82 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RPS3A	P61247	264 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	NOMO3	P69849	1222 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RPP30	P78346	268 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RBP5	P82980	135 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CD83	Q01151	205 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PRICKLE4	Q2TBC4	344 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KRTAP15-1	Q3LI76	137 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	WDR72	Q3MJ13	1102 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	FAXC	Q5TGI0	409 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ANO7	Q6IWH7	933 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	MRNIP	Q6NTE8	343 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TATDN1	Q6P1N9	297 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZDHHC24	Q6UX98	284 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DPP8	Q6V1X1	898 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DENND5B	Q6ZUT9	1274 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RAPH1	Q70E73	1250 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	LRRC8D	Q7L1W4	858 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SLFN11	Q7Z7L1	901 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	FBXO18	Q8NFZ0	1043 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	OR7D4	Q8NG98	312 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	METTL6	Q8TCB7	284 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZNF480	Q8WV37	535 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	STON2	Q8WXE9	905 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZNF764	Q96H86	408 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZNF845	Q96IR2	970 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	MED15	Q96RN5	788 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	WRNIP1	Q96S55	665 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	FUZ	Q9BT04	418 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	MUC13	Q9H3R2	512 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RABEP2	Q9H5N1	569 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	BCO1	Q9HAY6	547 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	BARX1	Q9HBU1	254 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZDHHC7	Q9NXF8	308 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SIDT1	Q9NXL6	827 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TAS2R10	Q9NYW0	307 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	EPS15L1	Q9UBC2	864 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KCND3	Q9UK17	655 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	GTF3C4	Q9UKN8	822 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CLCA2	Q9UQC9	943 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TBC1D30	Q9Y2I9	924 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KNSTRN	Q9Y448	316 aa		4.17	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PRSS29P	A6NIE9	313 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ADAM20	O43506	726 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	NTSR2	O95665	410 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KNG1	P01042	644 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SLC4A1	P02730	911 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TFRC	P02786	760 aa	Known RBP	4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CHGB	P05060	677 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	GRP	P07492	148 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ANXA6	P08133	673 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	QDPR	P09417	244 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ALAS1	P13196	640 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CPA1	P15085	419 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZNF28	P17035	718 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	FPR1	P21462	350 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	FGFR4	P22455	802 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SERPINA4	P29622	427 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	GUCY1A2	P33402	732 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ADCY8	P40145	1251 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CD86	P42081	329 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	MCM2	P49736	904 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RBM5	P52756	815 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RAD23A	P54725	363 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	UCP3	P55916	312 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	HSD17B7	P56937	341 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ANTXR2	P58335	489 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PSMC6	P62333	389 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	AP1B1	Q10567	949 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	BFSP1	Q12934	665 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PRPF4B	Q13523	1007 aa	Known RBP	4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DCTN2	Q13561	401 aa	Known RBP	4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SLC29A2	Q14542	456 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RPS6KA2	Q15349	733 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PTPN14	Q15678	1187 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KYNU	Q16719	465 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DGKD	Q16760	1214 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TRIM60	Q495X7	471 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KRTCAP3	Q53RY4	240 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	BMP2KL	Q5H9B9	411 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	IGFL4	Q6B9Z1	124 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PLAG1	Q6DJT9	500 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RINT1	Q6NUQ1	792 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	UNC5D	Q6UXZ4	953 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	IKBIP	Q70UQ0	350 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CXXC5	Q7LFL8	322 aa	Known RBP	4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RASGRP3	Q8IV61	690 aa		4.16	□□□□□ -1.74
CLNS1A-208	ENST00000527265	THNSL1	Q8IYQ7	743 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms