RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 RALGAPA1Q6GYQ0 2036 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 NEDD8-MDP1E9PL57 170 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 XPO1O14980 1071 aaKnown RBP10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 HMBSP08397 361 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 CISD3P0C7P0 127 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 CCDC192P0DO97 292 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 CD19P15391 556 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 PPP1R2P41236 205 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 TNFRSF4P43489 277 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 PSEN1P49768 467 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 ATXN1P54253 815 aaKnown RBP10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 MARSP56192 900 aaKnown RBP10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 YWHAGP61981 247 aaKnown RBP eCLIP10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 EFEMP1Q12805 493 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 PAK1Q13153 545 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 CSRP2Q16527 193 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 CAMK4Q16566 473 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 TMEM270Q6UE05 265 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 TPGS1Q6ZTW0 290 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 TOGARAM2Q6ZUX3 1019 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 RRAGAQ7L523 313 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 EHBP1Q8NDI1 1231 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 MDGA1Q8NFP4 955 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 TSTD1Q8NFU3 115 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 ZC3H10Q96K80 434 aaKnown RBP10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 KREMEN1Q96MU8 473 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 NT5C1BQ96P26 610 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 TPSD1Q9BZJ3 242 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 DNAI2Q9GZS0 605 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 DUSP15Q9H1R2 295 aaPredicted RBP10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 ARRDC1-AS1Q9H2J1 176 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 DEC1Q9P2X7 70 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 RASAL2Q9UJF2 1139 aa10.96□□□□□ -0.65
PRPF40B-204ENST00000527253 GON4LQ3T8J9 2241 aa10.96□□□□□ -0.66
PRPF40B-204ENST00000527253 CNOT1A5YKK6 2376 aaKnown RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 MED19A0JLT2 244 aaPredicted RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 BICDL2A1A5D9 508 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 TBC1D3BA6NDS4 549 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 PRRT4C9JH25 899 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 P4HA2O15460 535 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 CACNG3O60359 315 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 GDF9O60383 454 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 LRP3O75074 770 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 EPN2O95208 641 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 ZBED1O96006 694 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 RALAP11233 206 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 TYRP14679 529 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 BCKDHBP21953 392 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 TBXAS1P24557 533 aaPredicted RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 DGKEP52429 567 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 ZNF132P52740 706 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 UBE2HP62256 183 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 LMNB2Q03252 620 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 BST2Q10589 180 aaKnown RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 PUM1Q14671 1186 aaKnown RBP eCLIP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 C10orf76Q5T2E6 689 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 BTBD8Q5XKL5 378 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 ANO7Q6IWH7 933 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 PMF1Q6P1K2 205 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 LCLAT1Q6UWP7 414 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 PRR23CQ6ZRP0 262 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 IRF2BP1Q8IU81 584 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 FRMD1Q8N878 549 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 TERB1Q8NA31 727 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 CCDC26Q8TAB7 109 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 OLIG1Q8TAK6 271 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 CNOT6LQ96LI5 555 aaKnown RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 ACOX2Q99424 681 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 BBS2Q9BXC9 721 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 SMOC1Q9H4F8 434 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 RXFP3Q9NSD7 469 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 DNAJC17Q9NVM6 304 aaKnown RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 PLK2Q9NYY3 685 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 CHMP5Q9NZZ3 219 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 LSM7Q9UK45 103 aaKnown RBP10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 FBXO10Q9UK96 956 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 KIAA1257Q9ULG3 409 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 PCDHB4Q9Y5E5 795 aa10.95□□□□□ -0.66
PRPF40B-204ENST00000527253 SLC12A8A0AV02 714 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 YJEFN3A6XGL0 299 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 PRR5-ARHGAP8B1AHC4 643 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 E7ENQ6 273 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 PIK3R2O00459 728 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 PAEPP09466 180 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 CORO1AP31146 461 aaKnown RBP10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 WASP42768 502 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 RGS7P49802 495 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 BCAT1P54687 386 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 YWHAEP62258 255 aaKnown RBP10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 ARHGAP8P85298 464 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 APBA1Q02410 837 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 ADIGQ0VDE8 80 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 SF3A2Q15428 464 aaKnown RBP10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 CNGA2Q16280 664 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 PLA2G2CQ5R387 149 aa10.94□□□□□ -0.66
PRPF40B-204ENST00000527253 FYB2Q5VWT5 728 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms