RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TCF3P15923 654 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 DDX6P26196 483 aaKnown RBP eCLIP11.27□□□□□ -0.611e-6■■■□□ 15.5
NEDD8-205ENST00000527046 RFC1P35251 1148 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ATP5C1P36542 298 aaKnown RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 NSFP46459 744 aaKnown RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 GALCP54803 685 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 RPL7AP62424 266 aaKnown RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 MAMLD1Q13495 774 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ZNF77Q15935 545 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 TDRD12Q587J7 1177 aaKnown RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 EFHC1Q5JVL4 640 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 IER5LQ5T953 404 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ZDHHC17Q8IUH5 632 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 EMC1Q8N766 993 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 DQX1Q8TE96 717 aaKnown RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ELSPBP1Q96BH3 223 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ARHGEF26Q96DR7 871 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 SLC39A13Q96H72 371 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 NOX5Q96PH1 765 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 NPY6RQ99463 290 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 DDX23Q9BUQ8 820 aaKnown RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 TRIM7Q9C029 511 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 SMOC2Q9H3U7 446 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 TRPC7Q9HCX4 862 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 ANLNQ9NQW6 1124 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 TDP1Q9NUW8 608 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 SEPT11Q9NVA2 429 aaKnown RBP11.27□□□□□ -0.61
NEDD8-205ENST00000527046 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 NUMBLQ9Y6R0 609 aa11.27□□□□□ -0.61
NEDD8-205ENST00000527046 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 A0A0U1RQJ8 604 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 TMEM191CA6NGB0 347 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 SHISA7A6NL88 538 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 C2CD4BA6NLJ0 364 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 HEPACAM2A8MVW5 462 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 GOLGA8SH3BPF8 625 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 LEFTY2O00292 366 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ECI2O75521 394 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ENDOD1O94919 500 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 CYP1A2P05177 515 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ZNF252P-AS1Q0IIN9 211 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 EFEMP1Q12805 493 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 TRIP4Q15650 581 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-205ENST00000527046 CCDC14Q49A88 953 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ARHGAP15Q53QZ3 475 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 BTBD8Q5XKL5 378 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 Q6ZNB5 142 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 LRRC8AQ8IWT6 810 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ARHGAP18Q8N392 663 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ARFGAP1Q8N6T3 406 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 TDRD5Q8NAT2 981 aaKnown RBP11.26□□□□□ -0.61
NEDD8-205ENST00000527046 C3orf20Q8ND61 904 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ATRIPQ8WXE1 791 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 CENPIQ92674 756 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ACSF2Q96CM8 615 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ASIC4Q96FT7 647 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 KXD1Q9BQD3 176 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 FAM83CQ9BQN1 747 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 THAP2Q9H0W7 228 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 LINC00597Q9H2U6 94 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 POPDC2Q9HBU9 364 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ZFP14Q9HCL3 533 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 SMPD4Q9NXE4 827 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 OBP2AQ9NY56 170 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 ZMYM5Q9UJ78 669 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 TFR2Q9UP52 801 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 CPQQ9Y646 472 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 COL4A2P08572 1712 aa11.26□□□□□ -0.61
NEDD8-205ENST00000527046 TRAV19A0A0A6YYK7 116 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 OTOL1A6NHN0 477 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 GFRA2O00451 464 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 SART1O43290 800 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 MSI1O43347 362 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 HSF2BPO75031 334 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 DAB1O75553 588 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 STC2O76061 302 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 CALB1P05937 261 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 TPM1P09493 284 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 MBL2P11226 248 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 RALAP11233 206 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 NCAM1P13591 858 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 NOS2P35228 1153 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 MATKP42679 507 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 ATXN1P54253 815 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 RNASE9P60153 205 aaKnown RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 CCZ1BP86790 482 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 CCZ1P86791 482 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 FCHO2Q0JRZ9 810 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 USP4Q13107 963 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 TJAP1Q5JTD0 557 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 C10orf120Q5SQS8 335 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 FAM102AQ5T9C2 384 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-205ENST00000527046 HTR3DQ70Z44 454 aa11.25□□□□□ -0.61
NEDD8-205ENST00000527046 TAC4Q86UU9 113 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms