RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 RFC1P35251 1148 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-205ENST00000526954 ATP5C1P36542 298 aaKnown RBP17.27■□□□□ 0.36
CAPN1-205ENST00000526954 SLC7A9P82251 487 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 SYPL2Q5VXT5 272 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 PTCRAQ6ISU1 281 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-205ENST00000526954 GET4Q7L5D6 327 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-205ENST00000526954 CMTM8Q8IZV2 173 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 JOSD2Q8TAC2 188 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 ARHGEF26Q96DR7 871 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 ZSWIM3Q96MP5 696 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 SLC22A12Q96S37 553 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 TRPC7Q9HCX4 862 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 PRDM6Q9NQX0 595 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 UVRAGQ9P2Y5 699 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 MYO1AQ9UBC5 1043 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 ADGRG1Q9Y653 693 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 XIRP2A4UGR9 3374 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 TMEM191CA6NGB0 347 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 PJA2O43164 708 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 GJB6O95452 261 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 TBX18O95935 607 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 FLT3P36888 993 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 VAV2P52735 878 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 RNASE9P60153 205 aaKnown RBP17.26■□□□□ 0.35
CAPN1-205ENST00000526954 RPL7AP62424 266 aaKnown RBP17.26■□□□□ 0.35
CAPN1-205ENST00000526954 TFF2Q03403 129 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 AAK1Q2M2I8 961 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 DCAF6Q58WW2 860 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 C10orf120Q5SQS8 335 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 TRNP1Q6NT89 227 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 DCUN1D2Q6PH85 259 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 RSRC2Q7L4I2 434 aaKnown RBP17.26■□□□□ 0.35
CAPN1-205ENST00000526954 OTOP3Q7RTS5 596 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 TXLNBQ8N3L3 684 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 ARL14EPQ8N8R7 260 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-205ENST00000526954 FNIP1Q8TF40 1166 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 ZNF830Q96NB3 372 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-205ENST00000526954 MCEEQ96PE7 176 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 MYADMQ96S97 322 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 CYP2S1Q96SQ9 504 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 NPY6RQ99463 290 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 DESI2Q9BSY9 194 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 NUP85Q9BW27 656 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 SMOC2Q9H3U7 446 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 TMEM51Q9NW97 253 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 THEGQ9P2T0 379 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 DNMT3LQ9UJW3 386 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 NUDT5Q9UKK9 219 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 STAP1Q9ULZ2 295 aa17.26■□□□□ 0.35
CAPN1-205ENST00000526954 A0A0A6YYK5 440 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-205ENST00000526954 RCCD1A6NED2 376 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 BTNL10A8MVZ5 291 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 DPYSL4O14531 572 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 MTA2O94776 668 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 IGLV3-25P01717 112 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 PDGFRAP16234 1089 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 PTPN9P43378 593 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 NNTQ13423 1086 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 EIF4EBP2Q13542 120 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-205ENST00000526954 SLC25A52Q3SY17 297 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 RHOT2Q8IXI1 618 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 EMC1Q8N766 993 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 DQX1Q8TE96 717 aaKnown RBP17.25■□□□□ 0.35
CAPN1-205ENST00000526954 RXFP2Q8WXD0 754 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 RFFLQ8WZ73 363 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 PGAP3Q96FM1 320 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-205ENST00000526954 ASB16Q96NS5 453 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 PHF7Q9BWX1 381 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-205ENST00000526954 SLITRK6Q9H5Y7 841 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 TRPV4Q9HBA0 871 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 MARCH2Q9P0N8 246 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 EPS15L1Q9UBC2 864 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 ARHGAP26Q9UNA1 814 aa17.25■□□□□ 0.35
CAPN1-205ENST00000526954 TRUB2O95900 331 aaKnown RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 CKMP06732 381 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 MBL2P11226 248 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 LAMP2P13473 410 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 TCF3P15923 654 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 GPD1P21695 349 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 GBP2P32456 591 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 AVPR1AP37288 418 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 ZNF143P52747 638 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 EFEMP1Q12805 493 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 CCDC14Q49A88 953 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 BNIPLQ7Z465 357 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 ARID3BQ8IVW6 561 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 ZSCAN18Q8TBC5 510 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 SLC35G2Q8TBE7 412 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 ZNF564Q8TBZ8 553 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 CENPIQ92674 756 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 SMARCD2Q92925 531 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 ACSF2Q96CM8 615 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 ZFRQ96KR1 1074 aaKnown RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 KLF16Q9BXK1 252 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-205ENST00000526954 LACRTQ9GZZ8 138 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 NACA2Q9H009 215 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 CTTNBP2NLQ9P2B4 639 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 SFMBT1Q9UHJ3 866 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 HBS1LQ9Y450 684 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms