RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 NHSQ6T4R5 1651 aa2.15□□□□□ -2.06
CD44-212ENST00000524922 ADGRB1O14514 1584 aa2.15□□□□□ -2.06
CD44-212ENST00000524922 MYO5BQ9ULV0 1848 aa2.15□□□□□ -2.06
CD44-212ENST00000524922 NUP155O75694 1391 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 INSRP06213 1382 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 A0A088AWK7 358 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 INSIG1O15503 277 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 CA12O43570 354 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 CNOT3O75175 753 aaKnown RBP2.15□□□□□ -2.07
CD44-212ENST00000524922 GRPP07492 148 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 FGF2P09038 288 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 PRF1P14222 555 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 DGKEP52429 567 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 UCP3P55916 312 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 WNT3P56703 355 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 NANOS2P60321 138 aaKnown RBP2.15□□□□□ -2.07
CD44-212ENST00000524922 E2F1Q01094 437 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 ZNF260Q3ZCT1 412 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 LEXMQ3ZCV2 418 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 C10orf25Q5T742 122 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 RUSC1-AS1Q66K80 236 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 MTHFD1LQ6UB35 978 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 DPY19L3Q6ZPD9 716 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 COL23A1Q86Y22 540 aaPredicted RBP2.15□□□□□ -2.07
CD44-212ENST00000524922 ABRAQ8N0Z2 381 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 LRRC71Q8N4P6 559 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 C16orf52Q8NHV5 167 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 MAML1Q92585 1016 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 RSPRY1Q96DX4 576 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 DAZAP1Q96EP5 407 aaKnown RBP2.15□□□□□ -2.07
CD44-212ENST00000524922 HMCESQ96FZ2 354 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 KAZALD1Q96I82 304 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 TRIM54Q9BYV2 358 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 SMURF2Q9HAU4 748 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 GAR1Q9NY12 217 aaKnown RBP2.15□□□□□ -2.07
CD44-212ENST00000524922 PPLO60437 1756 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 TOPAZ1Q8N9V7 1692 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 CGNL1Q0VF96 1302 aa2.15□□□□□ -2.07
CD44-212ENST00000524922 KIAA1210Q9ULL0 1709 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 THSD7BQ9C0I4 1608 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 PHRF1Q9P1Y6 1649 aaKnown RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 ADAM10O14672 748 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 ABLIM3O94929 683 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 CLSTN1O94985 981 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 TOMM40O96008 361 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 FGAP02671 866 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 NPR1P16066 1061 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 AKAP5P24588 427 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 MMP13P45452 471 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 CCT4P50991 539 aaKnown RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 PDE6CP51160 858 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 GPSM2P81274 684 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 CFHR1Q03591 330 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 E2F2Q14209 437 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 TWIST1Q15672 202 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 DEPDC1Q5TB30 811 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 B3GNT9Q6UX72 402 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 DEF8Q6ZN54 512 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 MEPCEQ7L2J0 689 aaKnown RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 CAND1Q86VP6 1230 aaKnown RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 ZDHHC17Q8IUH5 632 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 IZUMO1Q8IYV9 350 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 PCSK9Q8NBP7 692 aaKnown RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 ABHD11Q8NFV4 315 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 BRIX1Q8TDN6 353 aaKnown RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 HSPBAP1Q96EW2 488 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 WDYHV1Q96HA8 205 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 NUP88Q99567 741 aaPredicted RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 P2RX7Q99572 595 aaKnown RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 CGRRF1Q99675 332 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 CIPCQ9C0C6 399 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 EBF3Q9H4W6 596 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 ATP6V0A4Q9HBG4 840 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 GABBR1Q9UBS5 961 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 TNRC6CQ9HCJ0 1690 aaKnown RBP2.14□□□□□ -2.07
CD44-212ENST00000524922 MAP3K19Q56UN5 1328 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 ITSN1Q15811 1721 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 IFT172Q9UG01 1749 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 A0A0C4DFX4 3053 aa2.14□□□□□ -2.07
CD44-212ENST00000524922 USP54Q70EL1 1684 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 KIF1BO60333 1816 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 SBF2Q86WG5 1849 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 WNK3Q9BYP7 1800 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 H3BUI4 141 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 SOCS2O14508 198 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 EXOC3O60645 756 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 DTNBO60941 627 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 USP1O94782 785 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 FGBP02675 491 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 A1BGP04217 495 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 APEHP13798 732 aaKnown RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 IL1R2P27930 398 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 LRPAP1P30533 357 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 CCKARP32238 428 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 CTCFP49711 727 aaPredicted RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 ALDH5A1P51649 535 aaPredicted RBP2.13□□□□□ -2.07
CD44-212ENST00000524922 PDE1AP54750 535 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 TPTEP56180 551 aa2.13□□□□□ -2.07
CD44-212ENST00000524922 RAB1AP62820 205 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms