RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 SLC2A3P11169 496 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 FGFR3P22607 806 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 CYP2F1P24903 491 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 ARSEP51690 589 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 CBX1P83916 185 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 GABPB1Q06547 395 aaPredicted RBP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 NOMO1Q15155 1222 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 TAF5Q15542 800 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 USP41Q3LFD5 358 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 BRMS1LQ5PSV4 323 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 IZUMO3Q5VZ72 239 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 TXNRD3NBQ6F5E7 133 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 KIAA1841Q6NSI8 718 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 TMC3Q7Z5M5 1100 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 TADA2BQ86TJ2 420 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 MON1AQ86VX9 555 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 ZDHHC14Q8IZN3 488 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 NUP93Q8N1F7 819 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 OR10T2Q8NGX3 314 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 CLEC4CQ8WTT0 213 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 NT5C3BQ969T7 300 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 ACSF2Q96CM8 615 aaPredicted RBP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 FAF2Q96CS3 445 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 SCLYQ96I15 445 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 PIWIL1Q96J94 861 aaKnown RBP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 TTC25Q96NG3 672 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 CDK5RAP1Q96SZ6 601 aaKnown RBP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 PKMYT1Q99640 499 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 EPAS1Q99814 870 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 RTP3Q9BQQ7 232 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 TTPALQ9BTX7 342 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 PHACTR1Q9C0D0 580 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 OLA1Q9NTK5 396 aaKnown RBP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 ZDHHC18Q9NUE0 388 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 ABI2Q9NYB9 513 aaPredicted RBP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 PAK5Q9P286 719 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 PRKAG2Q9UGJ0 569 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 SLC12A6Q9UHW9 1150 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 TBX21Q9UL17 535 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 FZD10Q9ULW2 581 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 SHOC2Q9UQ13 582 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 R3HDM2Q9Y2K5 976 aaKnown RBP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 TSC2P49815 1807 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 HMGB1P1B2RPK0 211 aaPredicted RBP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 HHLA1C9JL84 531 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 PPP1R12AO14974 1030 aaPredicted RBP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 EIF3HO15372 352 aaKnown RBP eCLIP10.36□□□□□ -0.751e-10■■□□□ 13.6
VPS13B-212ENST00000524330 NCAM2O15394 837 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 GABBR2O75899 941 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 BEST1O76090 585 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 BAIAP3O94812 1187 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 TIMP1P01033 207 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 IFNB1P01574 187 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 IVLP07476 585 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 GALTP07902 379 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 FAM153BP0C7A2 387 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 RAG1P15918 1043 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 ATP2A2P16615 1042 aaKnown RBP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 LAG3P18627 525 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 ATP5DP30049 168 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 L1CAMP32004 1257 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SERPINB6P35237 376 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 HSD17B3P37058 310 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 HCAR3P49019 387 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SLC11A1P49279 550 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 TUFMP49411 452 aaKnown RBP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 CTCFP49711 727 aaPredicted RBP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 ITGA8P53708 1063 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 YWHAGP61981 247 aaKnown RBP eCLIP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 COG7P83436 770 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 CREMQ03060 361 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SCAPQ12770 1279 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 GPS1Q13098 491 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 NME3Q13232 169 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 MRPL58Q14197 206 aaKnown RBP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 OASLQ15646 514 aaKnown RBP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 P3H1Q32P28 736 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 FAM153CQ494X1 144 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SH3PXD2AQ5TCZ1 1133 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 BSPRYQ5W0U4 402 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SLC9A4Q6AI14 798 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 TRNP1Q6NT89 227 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 ARFGAP2Q8N6H7 521 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 ZMIZ2Q8NF64 920 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 FBXO25Q8TCJ0 367 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 ZNF558Q96NG5 402 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SERPINB11Q96P15 392 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 PEBP4Q96S96 227 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 KCNK16Q96T55 309 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 BRD8Q9H0E9 1235 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 PABPC3Q9H361 631 aaKnown RBP10.36□□□□□ -0.75
VPS13B-212ENST00000524330 WDCPQ9H6R7 721 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 DDIT4Q9NX09 232 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 GRHL1Q9NZI5 618 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 DNAJB4Q9UDY4 337 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 FAM153AQ9UHL3 310 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 PLAAQ9Y263 795 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 SSX2IPQ9Y2D8 614 aa10.36□□□□□ -0.75
VPS13B-212ENST00000524330 ATP8A1Q9Y2Q0 1164 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms