RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	NELL1	Q92832	810 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	TBC1D20	Q96BZ9	403 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	PDP2	Q9P2J9	529 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	TPCN1	Q9ULQ1	816 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	EIF2AK4	Q9P2K8	1649 aa	Known RBP	5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	WDR27	A2RRH5	827 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	CGB1	A6NKQ9	187 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655		J3KRW8	73 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	SLC16A6	O15403	523 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	AHSG	P02765	367 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	CSTB	P04080	98 aa	Known RBP	5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	NR2F6	P10588	404 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	TSHR	P16473	764 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	TNFAIP3	P21580	790 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	ITPKB	P27987	946 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	NDUFV1	P49821	464 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	RAB1A	P62820	205 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	HABP2	Q14520	560 aa	Predicted RBP	5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	INTS11	Q5TA45	600 aa	Known RBP	5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	THEMIS2	Q5TEJ8	643 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	ZNF280D	Q6N043	979 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	PGBD2	Q6P3X8	592 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	CYP26C1	Q6V0L0	522 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	MAATS1	Q7Z4T9	603 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	FAM90A1	Q86YD7	464 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	PDILT	Q8N807	584 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	NAXE	Q8NCW5	288 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	PSD4	Q8NDX1	1056 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	ANKS1A	Q92625	1134 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	DPF1	Q92782	380 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	TNPO1	Q92973	898 aa	Known RBP	5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	RGMA	Q96B86	450 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	PGBD1	Q96JS3	809 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	COLEC11	Q9BWP8	271 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	TTLL2	Q9BWV7	592 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	UNK	Q9C0B0	810 aa	Known RBP	5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	AMBRA1	Q9C0C7	1298 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	RRN3	Q9NYV6	651 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	ABCF2	Q9UG63	623 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	FBXO2	Q9UK22	296 aa	Predicted RBP	5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	ENTPD2	Q9Y5L3	495 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	SNX13	Q9Y5W8	968 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	ARHGEF10	O15013	1369 aa		5.42	□□□□□ -1.54
SREK1-213	ENST00000523655	OVOS2	A0A0G2JMS6	1433 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	OVOS2	A0A0J9YW53	1432 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	OVOS2	Q6IE36	1432 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	COL3A1	P02461	1466 aa	Predicted RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655		A0A0B4J269	797 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	POM121B	A6NF01	834 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	WIPF3	A6NGB9	483 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	NCAM2	O15394	837 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	FTL	P02792	175 aa	Predicted RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	EIF5	P55010	431 aa	Known RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	SRSF4	Q08170	494 aa	Known RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	TUBB3	Q13509	450 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	HLX	Q14774	488 aa	Predicted RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	VPS53	Q5VIR6	699 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	GLCCI1	Q86VQ1	547 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	PPP1R3B	Q86XI6	285 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	SRRM1	Q8IYB3	904 aa	Known RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	AOPEP	Q8N6M6	819 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	CELF5	Q8N6W0	485 aa	Known RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	RNF152	Q8N8N0	203 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	C3orf20	Q8ND61	904 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	SCAMP4	Q969E2	229 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	NT5C1B	Q96P26	610 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	HAPLN3	Q96S86	360 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	TPSD1	Q9BZJ3	242 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	ZMAT3	Q9HA38	289 aa	Known RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	NEU2	Q9Y3R4	380 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	PCDHGB2	Q9Y5G2	931 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	PCDHA1	Q9Y5I3	950 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	COL14A1	Q05707	1796 aa	Known RBP	5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	KIF15	Q9NS87	1388 aa		5.41	□□□□□ -1.54
SREK1-213	ENST00000523655	CASKIN1	Q8WXD9	1431 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	PRSS47	A8MTI9	375 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	PHGDH	O43175	533 aa	Known RBP	5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	TH	P07101	528 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	GPD1	P21695	349 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	RXRG	P48443	463 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	PIK3CG	P48736	1102 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	HK3	P52790	923 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	SOX10	P56693	466 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	SP2	Q02086	613 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	EIF2B5	Q13144	721 aa	Known RBP	5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	NOG	Q13253	232 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	FGL2	Q14314	439 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	TMEM119	Q4V9L6	283 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	RBM20	Q5T481	1227 aa	Known RBP	5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	HEATR3	Q7Z4Q2	680 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	SYTL1	Q8IYJ3	562 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	FAM9B	Q8IZU0	186 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	CCDC89	Q8N998	374 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	ZNF527	Q8NB42	609 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	IL31RA	Q8NI17	732 aa		5.4	□□□□□ -1.54
SREK1-213	ENST00000523655	SNRNP27	Q8WVK2	155 aa	Known RBP	5.4	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms