RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 C10orf120Q5SQS8 335 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 POTEHQ6S545 545 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 RSRC2Q7L4I2 434 aaKnown RBP25.25■■□□□ 1.63
PVT1-212ENST00000521951 RHOT2Q8IXI1 618 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 ZNF564Q8TBZ8 553 aaPredicted RBP25.25■■□□□ 1.63
PVT1-212ENST00000521951 NECTIN4Q96NY8 510 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 SLC22A12Q96S37 553 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 CYP2S1Q96SQ9 504 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 RNF38Q9H0F5 515 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 POMKQ9H5K3 350 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 TASP1Q9H6P5 420 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 OSGEPQ9NPF4 335 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 PPP2R2CQ9Y2T4 447 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 DUSP10Q9Y6W6 482 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 DENND4AQ7Z401 1863 aa25.24■■□□□ 1.63
PVT1-212ENST00000521951 COCHO43405 550 aa25.24■■□□□ 1.63
PVT1-212ENST00000521951 ATP5C1P36542 298 aaKnown RBP25.24■■□□□ 1.63
PVT1-212ENST00000521951 SMAD4Q13485 552 aaKnown RBP25.24■■□□□ 1.63
PVT1-212ENST00000521951 MSANTD2Q6P1R3 559 aa25.24■■□□□ 1.63
PVT1-212ENST00000521951 GET4Q7L5D6 327 aaPredicted RBP25.24■■□□□ 1.63
PVT1-212ENST00000521951 TADA2BQ86TJ2 420 aa25.24■■□□□ 1.63
PVT1-212ENST00000521951 CDK5RAP1Q96SZ6 601 aaKnown RBP25.24■■□□□ 1.63
PVT1-212ENST00000521951 OLA1Q9NTK5 396 aaKnown RBP25.24■■□□□ 1.63
PVT1-212ENST00000521951 A0A0A6YYK5 440 aaPredicted RBP25.23■■□□□ 1.63
PVT1-212ENST00000521951 SOBPA7XYQ1 873 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 MDM4O15151 490 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 MBTPS2O43462 519 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 HDCP19113 662 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 GPD1P21695 349 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 PITX1P78337 314 aaPredicted RBP25.23■■□□□ 1.63
PVT1-212ENST00000521951 OGDHQ02218 1023 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 EFEMP1Q12805 493 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 KIF5AQ12840 1032 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 CBX2Q14781 532 aaPredicted RBP25.23■■□□□ 1.63
PVT1-212ENST00000521951 KLHDC10Q6PID8 442 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 ARL14EPQ8N8R7 260 aaPredicted RBP25.23■■□□□ 1.63
PVT1-212ENST00000521951 DQX1Q8TE96 717 aaKnown RBP25.23■■□□□ 1.63
PVT1-212ENST00000521951 CFAP57Q96MR6 1250 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 SALL4Q9UJQ4 1053 aa25.23■■□□□ 1.63
PVT1-212ENST00000521951 EYSQ5T1H1 3165 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 BTNL10A8MVZ5 291 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 MTA2O94776 668 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 OLFM2O95897 454 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 PFKLP17858 780 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 LEXMQ3ZCV2 418 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 CCDC14Q49A88 953 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 NPAS3Q8IXF0 933 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 FGF13Q92913 245 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 NT5C3BQ969T7 300 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 BTBD6Q96KE9 485 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 ZSWIM3Q96MP5 696 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 NPY6RQ99463 290 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 SLITRK6Q9H5Y7 841 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 RRN3Q9NYV6 651 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 TRIM10Q9UDY6 481 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 SFMBT1Q9UHJ3 866 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 DNMT3LQ9UJW3 386 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 ANAPC7Q9UJX3 599 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 DOCK8Q8NF50 2099 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 TRAV19A0A0A6YYK7 116 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 TFE3P19532 575 aaPredicted RBP25.22■■□□□ 1.63
PVT1-212ENST00000521951 SDC4P31431 198 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 ZNF143P52747 638 aaPredicted RBP25.22■■□□□ 1.63
PVT1-212ENST00000521951 SLC25A52Q3SY17 297 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 ADAM33Q9BZ11 813 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 NACA2Q9H009 215 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 PRDM6Q9NQX0 595 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 ZMYM5Q9UJ78 669 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 RASAL2Q9UJF2 1139 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 STAP1Q9ULZ2 295 aa25.22■■□□□ 1.63
PVT1-212ENST00000521951 DPYSL4O14531 572 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 TRUB2O95900 331 aaKnown RBP25.21■■□□□ 1.63
PVT1-212ENST00000521951 PTPN9P43378 593 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 NOP2P46087 812 aaKnown RBP25.21■■□□□ 1.63
PVT1-212ENST00000521951 SULT1E1P49888 294 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 ZNF252P-AS1Q0IIN9 211 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 C15orf59Q2T9L4 293 aaPredicted RBP25.21■■□□□ 1.63
PVT1-212ENST00000521951 HS1BP3Q53T59 392 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 ZNF662Q6ZS27 426 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 TAC4Q86UU9 113 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 CMTM8Q8IZV2 173 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.21■■□□□ 1.63
PVT1-212ENST00000521951 ADAM32Q8TC27 787 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 FNIP1Q8TF40 1166 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 TBCBQ99426 244 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 SMOC2Q9H3U7 446 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 MARCH2Q9P0N8 246 aa25.21■■□□□ 1.63
PVT1-212ENST00000521951 CKMP06732 381 aa25.2■■□□□ 1.62
PVT1-212ENST00000521951 MBL2P11226 248 aaPredicted RBP25.2■■□□□ 1.62
PVT1-212ENST00000521951 ARHGAP25P42331 645 aa25.2■■□□□ 1.62
PVT1-212ENST00000521951 HADHBP55084 474 aaKnown RBP25.2■■□□□ 1.62
PVT1-212ENST00000521951 OTUD1Q5VV17 481 aaPredicted RBP25.2■■□□□ 1.62
PVT1-212ENST00000521951 MIB1Q86YT6 1006 aa25.2■■□□□ 1.62
PVT1-212ENST00000521951 MYADMQ96S97 322 aa25.2■■□□□ 1.62
PVT1-212ENST00000521951 CNPY3Q9BT09 278 aa25.2■■□□□ 1.62
PVT1-212ENST00000521951 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.2■■□□□ 1.623e-7■■■□□ 18.1
PVT1-212ENST00000521951 CDH7Q9ULB5 785 aa25.2■■□□□ 1.62
PVT1-212ENST00000521951 M0QYT0 321 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 MYO1FO00160 1098 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 CCP110O43303 1012 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms