RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 FAM200BP0CF97 657 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
MRPS28-206ENST00000520946 RALAP11233 206 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 CCDC130P13994 396 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 ADORA2BP29275 332 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 NCOA4Q13772 614 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 TEAD4Q15561 434 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 DCAF12L1Q5VU92 463 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 GLIS3Q8NEA6 775 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 CADM4Q8NFZ8 388 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 MDM1Q8TC05 714 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 ZNF507Q8TCN5 953 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 SLC2A14Q8TDB8 520 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 DHX58Q96C10 678 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 SIPA1Q96FS4 1042 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 DUSP9Q99956 384 aaKnown RBP12.13□□□□□ -0.47
MRPS28-206ENST00000520946 NUP58Q9BVL2 599 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 KLF16Q9BXK1 252 aaPredicted RBP12.13□□□□□ -0.47
MRPS28-206ENST00000520946 CUEDC2Q9H467 287 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 TM7SF3Q9NS93 570 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 CGNQ9P2M7 1197 aaKnown RBP12.13□□□□□ -0.47
MRPS28-206ENST00000520946 ZNF510Q9Y2H8 683 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 NME7Q9Y5B8 376 aa12.13□□□□□ -0.47
MRPS28-206ENST00000520946 TNRC6BQ9UPQ9 1833 aaKnown RBP12.12□□□□□ -0.47
MRPS28-206ENST00000520946 PLXND1Q9Y4D7 1925 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
MRPS28-206ENST00000520946 WASH3PC4AMC7 463 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 CD2BP2O95400 341 aaKnown RBP12.12□□□□□ -0.47
MRPS28-206ENST00000520946 ZDHHC11BP0C7U3 371 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 RARGP13631 454 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
MRPS28-206ENST00000520946 CHKAP35790 457 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 ZNF132P52740 706 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 SLC39A14Q15043 492 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 SGSM1Q2NKQ1 1148 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 FUT11Q495W5 492 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 TMPRSS6Q8IU80 811 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 GALNT15Q8N3T1 639 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 GOLGA5Q8TBA6 731 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 WBP2Q969T9 261 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 CDK5RAP1Q96SZ6 601 aaKnown RBP12.12□□□□□ -0.47
MRPS28-206ENST00000520946 TRIM9Q9C026 710 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 CIPCQ9C0C6 399 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 ITM2CQ9NQX7 267 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 FAM49BQ9NUQ9 324 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 WSB2Q9NYS7 404 aaPredicted RBP12.12□□□□□ -0.47
MRPS28-206ENST00000520946 IL37Q9NZH6 218 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 MARK1Q9P0L2 795 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 NAGPAQ9UK23 515 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 PCOLCE2Q9UKZ9 415 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 NFE2L3Q9Y4A8 694 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
MRPS28-206ENST00000520946 UBE4BO95155 1302 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 A0A087X0B3 334 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 FLRT2O43155 660 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 TGFB1I1O43294 461 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 STX6O43752 255 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 CILPO75339 1184 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 GJB3O75712 270 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 HMBSP08397 361 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 TPMTP51580 245 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 ORC1Q13415 861 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 HLA-BQ31612 363 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 C8orf34Q49A92 452 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 SOWAHCQ53LP3 525 aaPredicted RBP12.11□□□□□ -0.47
MRPS28-206ENST00000520946 ADAT2Q7Z6V5 191 aaKnown RBP12.11□□□□□ -0.47
MRPS28-206ENST00000520946 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
MRPS28-206ENST00000520946 SLCO6A1Q86UG4 719 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 FAM124AQ86V42 546 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 CACUL1Q86Y37 369 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 FUKQ8N0W3 1084 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 DNASE2BQ8WZ79 361 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 ZNF516Q92618 1163 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 SMOQ99835 787 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 XYLT2Q9H1B5 865 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 CD93Q9NPY3 652 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 KIAA1522Q9P206 1035 aaPredicted RBP12.11□□□□□ -0.47
MRPS28-206ENST00000520946 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
MRPS28-206ENST00000520946 EIF2B4Q9UI10 523 aaKnown RBP12.11□□□□□ -0.47
MRPS28-206ENST00000520946 NUDT5Q9UKK9 219 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 HCN2Q9UL51 889 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 SCML2Q9UQR0 700 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 PCDHA5Q9Y5H7 936 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 ADAMTS20P59510 1910 aa12.11□□□□□ -0.47
MRPS28-206ENST00000520946 A0A1W2PQH9 124 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 FAM92AA1XBS5 289 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 METTL12A8MUP2 240 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 MDM4O15151 490 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 CYP26A1O43174 497 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 BEST1O76090 585 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 RPN1P04843 607 aaKnown RBP12.1□□□□□ -0.47
MRPS28-206ENST00000520946 EPHX1P07099 455 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 CISD3P0C7P0 127 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 ZNF883P0CG24 379 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 HOXD13P35453 343 aa12.1□□□□□ -0.47
MRPS28-206ENST00000520946 CASP4P49662 377 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms