RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 NT5C3BQ969T7 300 aa18.6■□□□□ 0.57
SDC2-205ENST00000520233 NECTIN4Q96NY8 510 aa18.6■□□□□ 0.57
SDC2-205ENST00000520233 TASP1Q9H6P5 420 aa18.6■□□□□ 0.57
SDC2-205ENST00000520233 TRPC7Q9HCX4 862 aa18.6■□□□□ 0.57
SDC2-205ENST00000520233 OSGEPQ9NPF4 335 aa18.6■□□□□ 0.57
SDC2-205ENST00000520233 STAP1Q9ULZ2 295 aa18.6■□□□□ 0.57
SDC2-205ENST00000520233 COG5Q9UP83 839 aa18.6■□□□□ 0.57
SDC2-205ENST00000520233 A0A0U1RQJ8 604 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 ZSCAN12O43309 604 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 COCHO43405 550 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 KRT86O43790 486 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 SLC34A2O95436 690 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 OLFM2O95897 454 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 CEBPBP17676 345 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 SDC4P31431 198 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 PTPN9P43378 593 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 ZNF143P52747 638 aaPredicted RBP18.59■□□□□ 0.57
SDC2-205ENST00000520233 SLC25A52Q3SY17 297 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 C10orf120Q5SQS8 335 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 GPR158Q5T848 1215 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 MAFAQ8NHW3 353 aaPredicted RBP18.59■□□□□ 0.57
SDC2-205ENST00000520233 DQX1Q8TE96 717 aaKnown RBP18.59■□□□□ 0.57
SDC2-205ENST00000520233 ATRIPQ8WXE1 791 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 CALR3Q96L12 384 aaKnown RBP18.59■□□□□ 0.57
SDC2-205ENST00000520233 NPY6RQ99463 290 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 SLC46A2Q9BY10 475 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 LCMT1Q9UIC8 334 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 ANAPC7Q9UJX3 599 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 NUDT5Q9UKK9 219 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 USP15Q9Y4E8 981 aaPredicted RBP18.59■□□□□ 0.57
SDC2-205ENST00000520233 DUSP10Q9Y6W6 482 aa18.59■□□□□ 0.57
SDC2-205ENST00000520233 NOTCH4Q99466 2003 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 TBX18O95935 607 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 ARHGAP25P42331 645 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 NOP2P46087 812 aaKnown RBP18.58■□□□□ 0.56
SDC2-205ENST00000520233 SULT1E1P49888 294 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 OGDHQ02218 1023 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 SMAD4Q13485 552 aaKnown RBP18.58■□□□□ 0.56
SDC2-205ENST00000520233 CBX2Q14781 532 aaPredicted RBP18.58■□□□□ 0.56
SDC2-205ENST00000520233 CCDC14Q49A88 953 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 STXBP5Q5T5C0 1151 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 MAB21L3Q8N8X9 362 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 ING5Q8WYH8 240 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 CFAP57Q96MR6 1250 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 CNPY3Q9BT09 278 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 TRIM7Q9C029 511 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 NACA2Q9H009 215 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 RNF38Q9H0F5 515 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 SMOC2Q9H3U7 446 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 IP6K2Q9UHH9 426 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 SALL4Q9UJQ4 1053 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 DNMT3LQ9UJW3 386 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 C2orf16Q68DN1 1984 aa18.58■□□□□ 0.56
SDC2-205ENST00000520233 OBSL1O75147 1896 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 TRAV19A0A0A6YYK7 116 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 GRXCR2A6NFK2 248 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 MYO1FO00160 1098 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 MBTPS2O43462 519 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 TRUB2O95900 331 aaKnown RBP18.57■□□□□ 0.56
SDC2-205ENST00000520233 DESP17661 470 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 HDCP19113 662 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 PSMA2P25787 234 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 PITX1P78337 314 aaPredicted RBP18.57■□□□□ 0.56
SDC2-205ENST00000520233 EFEMP1Q12805 493 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 PIGHQ14442 188 aaPredicted RBP18.57■□□□□ 0.56
SDC2-205ENST00000520233 GET4Q7L5D6 327 aaPredicted RBP18.57■□□□□ 0.56
SDC2-205ENST00000520233 BNIPLQ7Z465 357 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 NPAS3Q8IXF0 933 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 CMTM8Q8IZV2 173 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 RNF10Q8N5U6 811 aaKnown RBP18.57■□□□□ 0.56
SDC2-205ENST00000520233 ARL14EPQ8N8R7 260 aaPredicted RBP18.57■□□□□ 0.56
SDC2-205ENST00000520233 PGAP3Q96FM1 320 aaPredicted RBP18.57■□□□□ 0.56
SDC2-205ENST00000520233 SERPINB11Q96P15 392 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 CYP2S1Q96SQ9 504 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 TBCBQ99426 244 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 POMKQ9H5K3 350 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 SLITRK6Q9H5Y7 841 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 TMEM51Q9NW97 253 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.57■□□□□ 0.56
SDC2-205ENST00000520233 GDE1Q9NZC3 331 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 MARCH2Q9P0N8 246 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 TRIM10Q9UDY6 481 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 SFMBT1Q9UHJ3 866 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 RASAL2Q9UJF2 1139 aa18.57■□□□□ 0.56
SDC2-205ENST00000520233 M0QYT0 321 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 MDM4O15151 490 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 CCP110O43303 1012 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 BUB1O43683 1085 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 ENDOD1O94919 500 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 IGLV3-25P01717 112 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 MBL2P11226 248 aaPredicted RBP18.56■□□□□ 0.56
SDC2-205ENST00000520233 WEE1P30291 646 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 GBP1P32455 592 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 SLC7A9P82251 487 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 ZNF252P-AS1Q0IIN9 211 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 NNTQ13423 1086 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 EIF4EBP2Q13542 120 aaPredicted RBP18.56■□□□□ 0.56
SDC2-205ENST00000520233 ACAP1Q15027 740 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 IFI16Q16666 785 aaKnown RBP18.56■□□□□ 0.56
SDC2-205ENST00000520233 C15orf59Q2T9L4 293 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms