RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 C5orf60A6NFR6 353 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CASTOR2A6NHX0 329 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 E7ESA3 106 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 H3BRJ5 948 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 MYO1CO00159 1063 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 BANF1O75531 89 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 AP1G2O75843 785 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 TMEM63AO94886 807 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 GHRP10912 638 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 SKIP12755 728 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 KRT15P19012 456 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 RBL1P28749 1068 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CCND3P30281 292 aaPredicted RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 TKTL1P51854 596 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 ATXN1P54253 815 aaKnown RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 GEMIN4P57678 1058 aaKnown RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CORO7P57737 925 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 VSTM1Q6UX27 236 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 AGMOQ6ZNB7 445 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 ARHGEF18Q6ZSZ5 1173 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CLEC20AQ6ZU45 233 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 BZW1Q7L1Q6 419 aaKnown RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 FAM35AQ86V20 835 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CCDC185Q8N715 623 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 RTP4Q96DX8 246 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CSPG4P5Q96PW8 444 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 ZIC5Q96T25 663 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 SAMD15Q9P1V8 674 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 RCOR3Q9P2K3 495 aaPredicted RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CACNG4Q9UBN1 327 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 FZD10Q9ULW2 581 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 PADI3Q9ULW8 664 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 PTCH2Q9Y6C5 1203 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 SYNJ2BP-COX16A0A087WUM0 186 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 TCRBV7S3A2A0A539 114 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 TMEM88BA6NKF7 163 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CAPN9O14815 690 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 PRKAR2AP13861 404 aaKnown RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 GBP2P32456 591 aaPredicted RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 STX2P32856 288 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 GAD2Q05329 585 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 DEUP1Q05D60 604 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 ADCY1Q08828 1119 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 PTK7Q13308 1070 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 KCNJ11Q14654 390 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 QPCTQ16769 361 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 SLC45A4Q5BKX6 768 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 EFHC2Q5JST6 749 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 PAQR9Q6ZVX9 377 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 FAM131BQ86XD5 332 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CYP4X1Q8N118 509 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 OTUD6BQ8N6M0 293 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 ANKS4BQ8N8V4 417 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 GSTCDQ8NEC7 633 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 NDRG1Q92597 394 aaKnown RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 SEC16BQ96JE7 1060 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 HHIPL1Q96JK4 782 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CABS1Q96KC9 395 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 FERMT1Q9BQL6 677 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 AGO3Q9H9G7 860 aaKnown RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 USP29Q9HBJ7 922 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 POPDC2Q9HBU9 364 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 CRTAC1Q9NQ79 661 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 MIOSQ9NXC5 875 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 COX16Q9P0S2 106 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 FETUBQ9UGM5 382 aa8.75□□□□□ -1.01
HMGB4-203ENST00000519684 TIMM13Q9Y5L4 95 aaPredicted RBP8.75□□□□□ -1.01
HMGB4-203ENST00000519684 GOLGA6L7A0A1B0GV03 622 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 M0QYT0 321 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ZNF623O75123 536 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 SPAG6O75602 509 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 CABYRO75952 493 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 BEST1O76090 585 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 STK10O94804 968 aaKnown RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 MAP3K6O95382 1288 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 PAX3P23760 479 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 CST5P28325 142 aaPredicted RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 NRLP54845 237 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 GPX6P59796 221 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 GRIK3Q13003 919 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 NME3Q13232 169 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 LRRC14Q15048 493 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 RASA2Q15283 850 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 MSS51Q4VC12 460 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 RNF187Q5TA31 235 aaPredicted RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 KIAA0319Q5VV43 1072 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 HEATR6Q6AI08 1181 aaKnown RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 C3orf62Q6ZUJ4 267 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 VPS52Q8N1B4 723 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 KLHDC9Q8NEP7 349 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 MAML1Q92585 1016 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 MRRFQ96E11 262 aaKnown RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 SMARCD1Q96GM5 515 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 UROC1Q96N76 676 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ZNF317Q96PQ6 595 aaPredicted RBP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 QKIQ96PU8 341 aaKnown RBP eCLIP8.74□□□□□ -1.01
HMGB4-203ENST00000519684 SLC2A13Q96QE2 648 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 SMC6Q96SB8 1091 aa8.74□□□□□ -1.01
HMGB4-203ENST00000519684 ULBP1Q9BZM6 244 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms