RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 HBS1LQ9Y450 684 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 CICQ96RK0 1608 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 C15orf38-AP3S2A0A0A6YYH1 394 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 F5H423 210 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 AP3B1O00203 1094 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 DGKIO75912 1065 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 USP1O94782 785 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TOMM70O94826 608 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 RPL7AP62424 266 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SFSWAPQ12872 951 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TNFAIP8L3Q5GJ75 292 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SEL1L3Q68CR1 1132 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ARPINQ7Z6K5 226 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 NIM1KQ8IY84 436 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 DRAXINQ8NBI3 349 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ATXN7L3BQ96GX2 97 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PRPF18Q99633 342 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ZCWPW1Q9H0M4 648 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 DHX33Q9H6R0 707 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 C10orf88Q9H8K7 445 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 VRTNQ9H8Y1 702 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 EML4Q9HC35 981 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 GALNT8Q9NY28 637 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PTTG2Q9NZH5 202 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SAE1Q9UBE0 346 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 CIDEBQ9UHD4 219 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PKD1L3Q7Z443 1732 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TRPC5OSA6NMA1 111 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SIGLEC16A6NMB1 481 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 AKAP10O43572 662 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 IL18RAPO95256 599 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 BPGMP07738 259 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PAMP19021 973 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 RPL26P61254 145 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 RPS6P62753 249 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 MGAT5Q09328 741 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PRKD1Q15139 912 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SIX1Q15475 284 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 KIF19Q2TAC6 998 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PID1Q7Z2X4 250 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 DENND1AQ8TEH3 1009 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 FAM151AQ8WW52 585 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PPP1R36Q96LQ0 422 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 NLRP4Q96MN2 994 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TASP1Q9H6P5 420 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TYROBPO43914 113 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 SRP72O76094 671 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 HSPA1AP0DMV8 641 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 HSPA1BP0DMV9 641 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 ME2P23368 584 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 BAATQ14032 418 aaPredicted RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 UGP2Q16851 508 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 FNBP1LQ5T0N5 605 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 SNRNP48Q6IEG0 339 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TTC33Q6PID6 262 aaPredicted RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TSHZ1Q6ZSZ6 1077 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 DENND5BQ6ZUT9 1274 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 EMC1Q8N766 993 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TDRD5Q8NAT2 981 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 RIN3Q8TB24 985 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 ITFG2Q969R8 447 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 VPS39Q96JC1 886 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 CLPTM1LQ96KA5 538 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 MTMR12Q9C0I1 747 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 ING2Q9H160 280 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 BCAS3Q9H6U6 928 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 FBXO28Q9NVF7 368 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 FBXO40Q9UH90 709 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 ZNF180Q9UJW8 692 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 POLIQ9UNA4 740 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 RGPD5Q99666 1765 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 HNRNPRO43390 633 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 DCXO43602 365 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 PIAS1O75925 651 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 COX4I1P13073 169 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TCN1P20061 433 aaPredicted RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 MMP8P22894 467 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 MAP4P27816 1152 aaKnown RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 CDKN2BP42772 138 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 GABRB2P47870 512 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 ATXN3P54252 364 aaPredicted RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 MYL6P60660 151 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 LLGL2Q6P1M3 1020 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TRIM67Q6ZTA4 783 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 HACE1Q8IYU2 909 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 LMO3Q8TAP4 145 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 RMND5BQ96G75 393 aaPredicted RBP6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TUBGCP5Q96RT8 1024 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 SYT11Q9BT88 431 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 HACD3Q9P035 362 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 SEPT3Q9UH03 358 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 MYRFQ9Y2G1 1151 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 INPP5FQ9Y2H2 1132 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 LTBP4Q8N2S1 1624 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 TMEM150BA6NC51 233 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 C2orf71A6NGG8 1288 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 KLF11O14901 512 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 OGTO15294 1046 aa6.87□□□□□ -1.31
CPNE3-203ENST00000517490 CAPN15O75808 1086 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms