RNA–Protein interactions for RNA: ENST00000516296.1

RNU1-143P-201, Transcript of RNA, U1 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU1-143P, Length 146 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-143P-201ENST00000516296 TMEM176AQ96HP8 235 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 CPB2Q96IY4 423 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 SNX27Q96L92 541 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 NLRP4Q96MN2 994 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 C7orf26Q96N11 449 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ZMAT2Q96NC0 199 aaKnown RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ANKRD27Q96NW4 1050 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 FAM111AQ96PZ2 611 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 RAB3IPQ96QF0 476 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 SRPK1Q96SB4 655 aaKnown RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 KCTD15Q96SI1 283 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 CYTH2Q99418 400 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 TBCBQ99426 244 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 LPIN3Q9BQK8 851 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 GORASP1Q9BQQ3 440 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 MRPL45Q9BRJ2 306 aaKnown RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 FDXACB1Q9BRP7 624 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ADPGKQ9BRR6 497 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 TRIM56Q9BRZ2 755 aaKnown RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ZNF670Q9BS34 389 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 TSSK1BQ9BXA7 367 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 TMEM120AQ9BXJ8 343 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 FRMD8Q9BZ67 464 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 MAGEB5Q9BZ81 275 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 INO80BQ9C086 356 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 RNPEPQ9H4A4 650 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 SMARCAD1Q9H4L7 1026 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ASB7Q9H672 318 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 DENND2DQ9H6A0 471 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 NRDE2Q9H7Z3 1164 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ETNK1Q9HBU6 452 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 NPHS2Q9NP85 383 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 FBXO6Q9NRD1 293 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ETNK2Q9NVF9 386 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ASNSD1Q9NWL6 643 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 NXF1Q9UBU9 619 aaKnown RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ZFP69BQ9UJL9 534 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 TSPAN16Q9UKR8 245 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ITGA11Q9UKX5 1188 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 EMCNQ9ULC0 261 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 PLA2G4CQ9UP65 541 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 AGTPBP1Q9UPW5 1226 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 C2CD2Q9Y426 696 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 LRRC42Q9Y546 428 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 CEP83Q9Y592 693 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 KIF26AQ9ULI4 1882 aaPredicted RBP3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 ALPK3Q96L96 1907 aa3.36□□□□□ -1.87
RNU1-143P-201ENST00000516296 NINQ8N4C6 2090 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 PRRC2BQ5JSZ5 2229 aaKnown RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 MTCL1Q9Y4B5 1905 aaKnown RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 THSD7BQ9C0I4 1608 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 IQANK1A0A1B0GTG1 560 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 DCAF8L1A6NGE4 600 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 C2orf71A6NGG8 1288 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 A6NHS1 94 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 UNCXA6NJT0 531 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 E7ENQ6 273 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 I6L893 689 aaPredicted RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 PIK3R2O00459 728 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 FCHO1O14526 889 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 CXCL11O14625 94 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 ZNF195O14628 629 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 APOL1O14791 398 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 SPTLC1O15269 473 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 KCNN4O15554 427 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 MFSD11O43934 449 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 PRPSAP2O60256 369 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 LPXNO60711 386 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 HNRNPCL1O60812 293 aaKnown RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 GCATO75600 419 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 GRAP2O75791 330 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 ALDH1A2O94788 518 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 METTL18O95568 372 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 AMHP03971 560 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 VTNP04004 478 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 BPGMP07738 259 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 KRT19P08727 400 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 ZNF286BP0CG31 522 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 TROVE2P10155 538 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 RARBP10826 455 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 FGF3P11487 239 aaPredicted RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 ALOX15P16050 662 aaPredicted RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 PDGFRAP16234 1089 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 ATP2A2P16615 1042 aaKnown RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 CYP2F1P24903 491 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 TKTP29401 623 aaKnown RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 SERPINB3P29508 390 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 HOXA11P31270 313 aaPredicted RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 STIP1P31948 543 aaKnown RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 RDXP35241 583 aaKnown RBP3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 CPOXP36551 454 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 GRIA1P42261 906 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 NUMBP49757 651 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 RGS7P49802 495 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 CSRP3P50461 194 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 TUBP50607 506 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 RAP1GDS1P52306 607 aa3.35□□□□□ -1.87
RNU1-143P-201ENST00000516296 ATXN1P54253 815 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms