RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 NEURL2Q9BR09 285 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 GPATCH1Q9BRR8 931 aaKnown RBP13.25□□□□□ -0.29
SMAD1-215ENST00000515385 CBWD1Q9BRT8 395 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 APOL6Q9BWW8 343 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 UNKQ9C0B0 810 aaKnown RBP13.25□□□□□ -0.29
SMAD1-215ENST00000515385 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 SLAIN2Q9P270 581 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 EPS15L1Q9UBC2 864 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 SLC8A2Q9UPR5 921 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 JAG2Q9Y219 1238 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 TEX264Q9Y6I9 313 aa13.25□□□□□ -0.29
SMAD1-215ENST00000515385 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 CCDC195A0A1B0GUA6 201 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 ADAM23O75077 832 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 RFPL1O75677 317 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 P4HBP07237 508 aaKnown RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 COX4I1P13073 169 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 TTKP33981 857 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 YWHAGP61981 247 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 PSMD6Q15008 389 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 ZBED5Q49AG3 693 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 NEPROQ6NW34 567 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 DPP8Q6V1X1 898 aaPredicted RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 GPR180Q86V85 440 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 USP6NLQ92738 828 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 EFHD2Q96C19 240 aaPredicted RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 PLEKHA8Q96JA3 519 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 SLC38A7Q9NVC3 462 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 DNAJC16Q9Y2G8 782 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 HEY1Q9Y5J3 304 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 RBBP6Q7Z6E9 1792 aaKnown RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 PRSS51A0A1B0GVH4 220 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 KBTBD13C9JR72 458 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 PIAS1O75925 651 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 SORBS2O94875 1100 aaKnown RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 GSTT2P0CG29 244 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 GSTT2BP0CG30 244 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 AKR1B1P15121 316 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 CDKN2BP42772 138 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 SERPINB9P50453 376 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 EVA1CP58658 441 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 CDKL1Q00532 357 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 GAD2Q05329 585 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 GABPAQ06546 454 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 MTMR2Q13614 643 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 ITGA7Q13683 1181 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 GK3PQ14409 553 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 DEPDC1Q5TB30 811 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 METTL21CQ5VZV1 264 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 CENPSQ8N2Z9 138 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 ZNF420Q8TAQ5 688 aaPredicted RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 AMNQ9BXJ7 453 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 PAIP1Q9H074 479 aaKnown RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 TRPC7Q9HCX4 862 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 GIN1Q9NXP7 522 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 PTBP2Q9UKA9 531 aaKnown RBP13.24□□□□□ -0.29
SMAD1-215ENST00000515385 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 B3GNT3Q9Y2A9 372 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 SPO11Q9Y5K1 396 aa13.24□□□□□ -0.29
SMAD1-215ENST00000515385 TIMM44O43615 452 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 CNOT3O75175 753 aaKnown RBP13.23□□□□□ -0.29
SMAD1-215ENST00000515385 PSMD10O75832 226 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 TMEM63AO94886 807 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 GYS1P13807 737 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 CCDC130P13994 396 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 GRK2P25098 689 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 CRKLP46109 303 aaKnown RBP13.23□□□□□ -0.29
SMAD1-215ENST00000515385 GABRB2P47870 512 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 IDH3AP50213 366 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 FLOT2Q14254 428 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 CYTH1Q15438 398 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 SMUG1Q53HV7 270 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 DCLRE1AQ6PJP8 1040 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 TIFABQ6ZNK6 161 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 FRMD7Q6ZUT3 714 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMAD1-215ENST00000515385 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 KBTBD7Q8WVZ9 684 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 SREK1Q8WXA9 508 aaKnown RBP13.23□□□□□ -0.29
SMAD1-215ENST00000515385 THAP11Q96EK4 314 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 RMND5BQ96G75 393 aaPredicted RBP13.23□□□□□ -0.29
SMAD1-215ENST00000515385 ZNF597Q96LX8 424 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 OLFM1Q99784 485 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 C11orf70Q9BRQ4 267 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 C20orf27Q9GZN8 174 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 ZNF395Q9H8N7 513 aaPredicted RBP13.23□□□□□ -0.29
SMAD1-215ENST00000515385 CLK4Q9HAZ1 481 aaKnown RBP13.23□□□□□ -0.29
SMAD1-215ENST00000515385 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 AP4S1Q9Y587 144 aa13.23□□□□□ -0.29
SMAD1-215ENST00000515385 A0A087WXM4 84 aa13.22□□□□□ -0.29
SMAD1-215ENST00000515385 ARHGEF37A1IGU5 675 aa13.22□□□□□ -0.29
SMAD1-215ENST00000515385 TRIM64CA6NLI5 447 aa13.22□□□□□ -0.29
SMAD1-215ENST00000515385 PRKCHP24723 683 aa13.22□□□□□ -0.29
SMAD1-215ENST00000515385 SLC1A6P48664 564 aa13.22□□□□□ -0.29
SMAD1-215ENST00000515385 RPS3AP61247 264 aaKnown RBP13.22□□□□□ -0.29
SMAD1-215ENST00000515385 GTF2BQ00403 316 aa13.22□□□□□ -0.29
SMAD1-215ENST00000515385 TAP1Q03518 808 aa13.22□□□□□ -0.29
SMAD1-215ENST00000515385 ACAP1Q15027 740 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms