RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RPL7AP62424 266 aaKnown RBP21.93■■□□□ 1.1
LSM6-207ENST00000515311 KIF5AQ12840 1032 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 DCAF6Q58WW2 860 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 C10orf120Q5SQS8 335 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 SYPL2Q5VXT5 272 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 ZNF662Q6ZS27 426 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 RSRC2Q7L4I2 434 aaKnown RBP21.93■■□□□ 1.1
LSM6-207ENST00000515311 SLC35G2Q8TBE7 412 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 FNIP1Q8TF40 1166 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 NT5C3BQ969T7 300 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 DDX23Q9BUQ8 820 aaKnown RBP21.93■■□□□ 1.1
LSM6-207ENST00000515311 SMOC2Q9H3U7 446 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 TASP1Q9H6P5 420 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 LCMT1Q9UIC8 334 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 STAP1Q9ULZ2 295 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 PPP2R2CQ9Y2T4 447 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 TRAV19A0A0A6YYK7 116 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 DPYSL4O14531 572 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 COCHO43405 550 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 PDGFRAP16234 1089 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 ATP5C1P36542 298 aaKnown RBP21.92■■□□□ 1.1
LSM6-207ENST00000515311 PTPN9P43378 593 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 ZNF143P52747 638 aaPredicted RBP21.92■■□□□ 1.1
LSM6-207ENST00000515311 HADHBP55084 474 aaKnown RBP21.92■■□□□ 1.1
LSM6-207ENST00000515311 SLC25A52Q3SY17 297 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 LEXMQ3ZCV2 418 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 GPR158Q5T848 1215 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 TXNDC8Q6A555 127 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 TRNP1Q6NT89 227 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 EMC1Q8N766 993 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 ZNF564Q8TBZ8 553 aaPredicted RBP21.92■■□□□ 1.1
LSM6-207ENST00000515311 RXFP2Q8WXD0 754 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 CALR3Q96L12 384 aaKnown RBP21.92■■□□□ 1.1
LSM6-207ENST00000515311 TSGA10Q9BZW7 698 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 LACRTQ9GZZ8 138 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 POMKQ9H5K3 350 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 TRPC7Q9HCX4 862 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 TMEM51Q9NW97 253 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.92■■□□□ 1.1
LSM6-207ENST00000515311 GDE1Q9NZC3 331 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 DNMT3LQ9UJW3 386 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 TFR2Q9UP52 801 aa21.92■■□□□ 1.1
LSM6-207ENST00000515311 GRXCR2A6NFK2 248 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 MBTPS2O43462 519 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 GPD1P21695 349 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 WEE1P30291 646 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 SDC4P31431 198 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 STXBP5Q5T5C0 1151 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 GET4Q7L5D6 327 aaPredicted RBP21.91■■□□□ 1.1
LSM6-207ENST00000515311 NPAS3Q8IXF0 933 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 MAB21L3Q8N8X9 362 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 DQX1Q8TE96 717 aaKnown RBP21.91■■□□□ 1.1
LSM6-207ENST00000515311 ING5Q8WYH8 240 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 FGF13Q92913 245 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 NPY6RQ99463 290 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 CNPY3Q9BT09 278 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 SLC46A2Q9BY10 475 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 NACA2Q9H009 215 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 ANAPC7Q9UJX3 599 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 DOCK8Q8NF50 2099 aa21.91■■□□□ 1.1
LSM6-207ENST00000515311 XIRP2A4UGR9 3374 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 ZSCAN12O43309 604 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 IGLV3-25P01717 112 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 HDCP19113 662 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 SLC7A9P82251 487 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 NNTQ13423 1086 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 PUS10Q3MIT2 529 aaKnown RBP21.9■■□□□ 1.1
LSM6-207ENST00000515311 CMTM8Q8IZV2 173 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 PGAP3Q96FM1 320 aaPredicted RBP21.9■■□□□ 1.1
LSM6-207ENST00000515311 TRIM7Q9C029 511 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 RNF38Q9H0F5 515 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 SLITRK6Q9H5Y7 841 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 OSGEPQ9NPF4 335 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 MARCH2Q9P0N8 246 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 NUDT5Q9UKK9 219 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 CDH7Q9ULB5 785 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 PYCARDQ9ULZ3 195 aa21.9■■□□□ 1.1
LSM6-207ENST00000515311 ZFP37Q9Y6Q3 630 aaPredicted RBP21.9■■□□□ 1.1
LSM6-207ENST00000515311 KRT86O43790 486 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 TBX18O95935 607 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 CKMP06732 381 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 DESP17661 470 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 KPNA1P52294 538 aaPredicted RBP21.89■■□□□ 1.09
LSM6-207ENST00000515311 OGDHQ02218 1023 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 EFEMP1Q12805 493 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 CCDC14Q49A88 953 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 BNIPLQ7Z465 357 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 TAC4Q86UU9 113 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 NIPA2Q8N8Q9 360 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 ARL14EPQ8N8R7 260 aaPredicted RBP21.89■■□□□ 1.09
LSM6-207ENST00000515311 CENPIQ92674 756 aaPredicted RBP21.89■■□□□ 1.09
LSM6-207ENST00000515311 TRIM44Q96DX7 344 aaPredicted RBP21.89■■□□□ 1.09
LSM6-207ENST00000515311 CFAP57Q96MR6 1250 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 SERPINB11Q96P15 392 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 SLC22A12Q96S37 553 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 IP6K2Q9UHH9 426 aa21.89■■□□□ 1.09
LSM6-207ENST00000515311 A0A0U1RQJ8 604 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 MYO1FO00160 1098 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 ENDOD1O94919 500 aa21.88■■□□□ 1.09
LSM6-207ENST00000515311 TRUB2O95900 331 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms