RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 CDC14AQ9UNH5 594 aa7.42□□□□□ -1.22
LDB2-216ENST00000515064 GPSM3Q9Y4H4 160 aa7.42□□□□□ -1.22
LDB2-216ENST00000515064 SPEF1Q9Y4P9 236 aa7.42□□□□□ -1.22
LDB2-216ENST00000515064 PCDHGA8Q9Y5G5 932 aa7.42□□□□□ -1.22
LDB2-216ENST00000515064 TMX2-CTNND1H3BSU7 103 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ADAMTS3O15072 1205 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 DDAH1O94760 285 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 SORBS2O94875 1100 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 IL1BP01584 269 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 SERPINA6P08185 405 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 CXCR2P25025 360 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 SOX5P35711 763 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 AQP5P55064 265 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 PHC1P78364 1004 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 OTUD4Q01804 1114 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 LLGL1Q15334 1064 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 EPHA7Q15375 998 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 CEP78Q5JTW2 689 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 AARS2Q5JTZ9 985 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 FAM26FQ5R3K3 315 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 PERM1Q5SV97 790 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ANKRD26P1Q6NSI1 321 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ZFP1Q6P2D0 407 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 NOP9Q86U38 636 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 HPS6Q86YV9 775 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ARID3BQ8IVW6 561 aaPredicted RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 HACE1Q8IYU2 909 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ZNF34Q8IZ26 560 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 TNIP2Q8NFZ5 429 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ANGPTL6Q8NI99 470 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ACAP3Q96P50 834 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 RIOK1Q9BRS2 568 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 INO80BQ9C086 356 aaPredicted RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 C12orf65Q9H3J6 166 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 ARMT1Q9H993 441 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 C12orf10Q9HB07 376 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ZNF304Q9HCX3 659 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.41□□□□□ -1.22
LDB2-216ENST00000515064 AGO2Q9UKV8 859 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 SLC8A2Q9UPR5 921 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 SORCS3Q9UPU3 1222 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 CORINQ9Y5Q5 1042 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 CACNA1SQ13698 1873 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 WDR90Q96KV7 1748 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 GOLGA8IPA6NC78 632 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 FAM172BPA6NC97 362 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 SNTNA6NMZ2 147 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 CCRL2O00421 344 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 TNPO2O14787 897 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 SNAP91O60641 907 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 KLHL2O95198 593 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 CCDC159P0C7I6 412 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 PRKCAP17252 672 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 NELFEP18615 380 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 TTKP33981 857 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 HADHBP55084 474 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 TRAF2Q12933 501 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 COASYQ13057 564 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 DGKDQ16760 1214 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 SMU1Q2TAY7 513 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 CAVIN4Q5BKX8 364 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 FGD3Q5JSP0 725 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 PGM2L1Q6PCE3 622 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 KIF6Q6ZMV9 814 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ZNF598Q86UK7 904 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 SLC51AQ86UW1 340 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 SLC51BQ86UW2 128 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 DCP2Q8IU60 420 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 CHERPQ8IWX8 916 aaKnown RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 DEFB107AQ8IZN7 70 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 CLIP4Q8N3C7 705 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.41□□□□□ -1.22
LDB2-216ENST00000515064 MIGA1Q8NAN2 632 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 KBTBD7Q8WVZ9 684 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 ATG4AQ8WYN0 398 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 FAM111AQ96PZ2 611 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 TMEM79Q9BSE2 394 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 COPS7BQ9H9Q2 264 aaPredicted RBP7.41□□□□□ -1.22
LDB2-216ENST00000515064 CXorf21Q9HAI6 301 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 CHST7Q9NS84 486 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 PI4KBQ9UBF8 816 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 DSEQ9UL01 958 aa7.41□□□□□ -1.22
LDB2-216ENST00000515064 HAT1O14929 419 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 ATP2A1O14983 1001 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 CCNT1O60563 726 aaKnown RBP7.4□□□□□ -1.22
LDB2-216ENST00000515064 ALX3O95076 343 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 KITP10721 976 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 KRT3P12035 628 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 NR2F2P24468 414 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 ACAT1P24752 427 aaKnown RBP7.4□□□□□ -1.22
LDB2-216ENST00000515064 MAP4P27816 1152 aaKnown RBP7.4□□□□□ -1.22
LDB2-216ENST00000515064 NKX2-5P52952 324 aaPredicted RBP7.4□□□□□ -1.22
LDB2-216ENST00000515064 CDH15P55291 814 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 P2RX3P56373 397 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 STX1BP61266 288 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 PPP2R2BQ00005 443 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 CDK18Q07002 472 aa7.4□□□□□ -1.22
LDB2-216ENST00000515064 HSPA14Q0VDF9 509 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms