RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 FOXD2O60548 495 aaPredicted RBP10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 ADAM23O75077 832 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 KLF8O95600 359 aaPredicted RBP10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 ZBED1O96006 694 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 PAEPP09466 180 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 VDRP11473 427 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TYRP14679 529 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 HNRNPLP14866 589 aaKnown RBP eCLIP10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TIE1P35590 1138 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TKTL1P51854 596 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 YWHAGP61981 247 aaKnown RBP eCLIP10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 PDE4CQ08493 712 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 LRMPQ12912 555 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 PAK1Q13153 545 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 PKDCCQ504Y2 493 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 PM20D1Q6GTS8 502 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 GRAMD4Q6IC98 578 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 ANO7Q6IWH7 933 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 MIB1Q86YT6 1006 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TRIM59Q8IWR1 403 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TRIML1Q8N9V2 468 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TXNDC5Q8NBS9 432 aaKnown RBP10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 NETO1Q8TDF5 533 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 NT5C1BQ96P26 610 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 BBS2Q9BXC9 721 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 TPSD1Q9BZJ3 242 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 ULBP1Q9BZM6 244 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 DNAJC17Q9NVM6 304 aaKnown RBP10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 WDR35Q9P2L0 1181 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 HESX1Q9UBX0 185 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 RASAL2Q9UJF2 1139 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 CDV3Q9UKY7 258 aaKnown RBP10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 HCN2Q9UL51 889 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 KIAA1257Q9ULG3 409 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 PCDHGA5Q9Y5G8 931 aa10.98□□□□□ -0.65
HMGXB3-205ENST00000514469 PTPRZ1P23471 2315 aaPredicted RBP10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 TBC1D3BA6NDS4 549 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 DCLK1O15075 740 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 TRIM24O15164 1050 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 GNA14O95837 355 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 KLKB1P03952 638 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 SETSIPP0DME0 302 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 CD19P15391 556 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 ATXN1P54253 815 aaKnown RBP10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 STX17P56962 302 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 UBE2HP62256 183 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 COG7P83436 770 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 GCNT1Q02742 428 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 ADIGQ0VDE8 80 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 CETN1Q12798 172 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 EFEMP1Q12805 493 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 EOGTQ5NDL2 527 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 PLA2G2CQ5R387 149 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 C10orf76Q5T2E6 689 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 EMC10Q5UCC4 262 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 TMEM270Q6UE05 265 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 LCLAT1Q6UWP7 414 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 TPGS1Q6ZTW0 290 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 TRMT11Q7Z4G4 463 aaKnown RBP10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 C11orf74Q86VG3 221 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 SCML4Q8N228 414 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 PPM1KQ8N3J5 372 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 ZNF513Q8N8E2 541 aaPredicted RBP10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 OLIG1Q8TAK6 271 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 KCTD13Q8WZ19 329 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 KAT5Q92993 513 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 P2RY11Q96G91 374 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 XPO6Q96QU8 1125 aaKnown RBP10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 ZSWIM1Q9BR11 485 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 RTKNQ9BST9 563 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 ARRDC1-AS1Q9H2J1 176 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 ZDHHC4Q9NPG8 344 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 ZNF510Q9Y2H8 683 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 STARD13Q9Y3M8 1113 aa10.97□□□□□ -0.65
HMGXB3-205ENST00000514469 MED19A0JLT2 244 aaPredicted RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 SLC30A4O14863 429 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 ALDH1A2O94788 518 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 RHOBTB1O94844 696 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 PENKP01210 267 aaPredicted RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 AFPP02771 609 aaKnown RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 ZNF806P0C7X5 589 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 CORO1AP31146 461 aaKnown RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 MPLP40238 635 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 DGKGP49619 791 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 ZNF132P52740 706 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 ELF2Q15723 593 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 USP39Q53GS9 565 aaKnown RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 FYB2Q5VWT5 728 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 PMS2CLQ68D20 193 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 RSRC2Q7L4I2 434 aaKnown RBP10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 ARHGEF19Q8IW93 802 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 FAM217AQ8IXS0 508 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 TFAP2BQ92481 460 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 PLD4Q96BZ4 506 aa10.96□□□□□ -0.65
HMGXB3-205ENST00000514469 DCLK3Q9C098 648 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms