RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ITGAVP06756 1048 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 CSF2RAP15509 400 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 GRIK1P39086 918 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 PLTPP55058 493 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 KRT81Q14533 505 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 TRIP13Q15645 432 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 NFE2Q16621 373 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 NECAB2Q7Z6G3 386 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 TMCO2Q7Z6W1 182 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 MAP7D3Q8IWC1 876 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 RNF168Q8IYW5 571 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 PLD5Q8N7P1 536 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 TTC13Q8NBP0 860 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 PIK3R5Q8WYR1 880 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 PGAP3Q96FM1 320 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 KCTD15Q96SI1 283 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 ZNF670Q9BS34 389 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 VN1R3Q9BXE9 311 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 FRMD8P1Q9BZ68 369 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 DHX35Q9H5Z1 703 aaKnown RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 RC3H2Q9HBD1 1191 aaKnown RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 WDR6Q9NNW5 1121 aaKnown RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 TMPRSS4Q9NRS4 437 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 ABI2Q9NYB9 513 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 WHRNQ9P202 907 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 AP4E1Q9UPM8 1137 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 NUP205Q92621 2012 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 I6L893 689 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 AMHP03971 560 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 NCAM1P13591 858 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 GBP1P32455 592 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 PGFP49763 221 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 SLC5A3P53794 718 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 DEFB103AP81534 67 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 LMNB2Q03252 620 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 ELAVL2Q12926 359 aaKnown RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 UAP1Q16222 522 aaPredicted RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 SLC9A4Q6AI14 798 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 RHBDF2Q6PJF5 856 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 NPNTQ6UXI9 565 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 TMC3Q7Z5M5 1100 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 PSTKQ8IV42 348 aaKnown RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 IQCKQ8N0W5 287 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 PYROXD2Q8N2H3 581 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 ATAD1Q8NBU5 361 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 ADAM32Q8TC27 787 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 EDEM1Q92611 657 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 ZBTB9Q96C00 473 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 FMO2Q99518 471 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 ANLNQ9NQW6 1124 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 ZNF148Q9UQR1 794 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 H3BQF6 201 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 CAPN9O14815 690 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 KRT14P02533 472 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 ETS1P14921 441 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 MAGEA11P43364 429 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 GPR15P49685 360 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
PVT1-203ENST00000513868 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 NME3Q13232 169 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 GPR17Q13304 367 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 EIF4EBP2Q13542 120 aaPredicted RBP13.36□□□□□ -0.27
PVT1-203ENST00000513868 TFDP2Q14188 446 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 NOMO1Q15155 1222 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 PPP6R3Q5H9R7 873 aaPredicted RBP13.36□□□□□ -0.27
PVT1-203ENST00000513868 MFSD5Q6N075 450 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 VSTM1Q6UX27 236 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 BEND5Q7L4P6 421 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 SCD5Q86SK9 330 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 SCN4BQ8IWT1 228 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 SLC7A14Q8TBB6 771 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 SNF8Q96H20 258 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 C8orf48Q96LL4 319 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 PGLYRP2Q96PD5 576 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 SLC9A7Q96T83 725 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 TMEM121Q9BTD3 319 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 MAK16Q9BXY0 300 aaKnown RBP13.36□□□□□ -0.27
PVT1-203ENST00000513868 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 C10orf88Q9H8K7 445 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 PRDM5Q9NQX1 630 aaPredicted RBP13.36□□□□□ -0.27
PVT1-203ENST00000513868 RRN3Q9NYV6 651 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 CWC15Q9P013 229 aaKnown RBP13.36□□□□□ -0.27
PVT1-203ENST00000513868 ASIC3Q9UHC3 531 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 PCDHB5Q9Y5E4 795 aa13.36□□□□□ -0.27
PVT1-203ENST00000513868 SYNJ2BP-COX16A0A087WUM0 186 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 PPFIA2O75334 1257 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 SYF2O95926 243 aaKnown RBP13.35□□□□□ -0.27
PVT1-203ENST00000513868 IGLV3-25P01717 112 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 ZSCAN5DPP0CG00 497 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 ITIH2P19823 946 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 ALDH7A1P49419 539 aaKnown RBP13.35□□□□□ -0.27
PVT1-203ENST00000513868 WDR5P61964 334 aaKnown RBP13.35□□□□□ -0.27
PVT1-203ENST00000513868 DDR2Q16832 855 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 SDHAF4Q5VUM1 108 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 PRSS55Q6UWB4 352 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms