RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 TKTL1P51854 596 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 SLC8A3P57103 927 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 PDE4CQ08493 712 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 EFEMP1Q12805 493 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 PLK5Q496M5 336 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 TADA2BQ86TJ2 420 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 ZNF276Q8N554 614 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 BBS2Q9BXC9 721 aa23.19■■□□□ 1.3
PACRGL-220ENST00000508952 DUSP15Q9H1R2 295 aaPredicted RBP23.19■■□□□ 1.3
PACRGL-220ENST00000508952 BICDL2A1A5D9 508 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 HMBSP08397 361 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 TYRP14679 529 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 TBXAS1P24557 533 aaPredicted RBP23.18■■□□□ 1.3
PACRGL-220ENST00000508952 ATXN1P54253 815 aaKnown RBP23.18■■□□□ 1.3
PACRGL-220ENST00000508952 BCAT1P54687 386 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 C10orf76Q5T2E6 689 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 Q6ZNB5 142 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 TERB1Q8NA31 727 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 MDGA1Q8NFP4 955 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 UBA3Q8TBC4 463 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 NDRG1Q92597 394 aaKnown RBP23.18■■□□□ 1.3
PACRGL-220ENST00000508952 KAT5Q92993 513 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 BHMTQ93088 406 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 LOXL4Q96JB6 756 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 ZC3H10Q96K80 434 aaKnown RBP23.18■■□□□ 1.3
PACRGL-220ENST00000508952 NT5C1BQ96P26 610 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 ULBP1Q9BZM6 244 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 DNAJC17Q9NVM6 304 aaKnown RBP23.18■■□□□ 1.3
PACRGL-220ENST00000508952 HESX1Q9UBX0 185 aa23.18■■□□□ 1.3
PACRGL-220ENST00000508952 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.17■■□□□ 1.3
PACRGL-220ENST00000508952 XPO1O14980 1071 aaKnown RBP23.17■■□□□ 1.3
PACRGL-220ENST00000508952 GDF9O60383 454 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 ADAM23O75077 832 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 KLKB1P03952 638 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 SDHBP21912 280 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 YWHAGP61981 247 aaKnown RBP eCLIP23.17■■□□□ 1.3
PACRGL-220ENST00000508952 BST2Q10589 180 aaKnown RBP23.17■■□□□ 1.3
PACRGL-220ENST00000508952 PAK1Q13153 545 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 SF3A2Q15428 464 aaKnown RBP23.17■■□□□ 1.3
PACRGL-220ENST00000508952 GRAMD4Q6IC98 578 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 TMEM270Q6UE05 265 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 RASSF3Q86WH2 238 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 PPM1KQ8N3J5 372 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 CNOT6LQ96LI5 555 aaKnown RBP23.17■■□□□ 1.3
PACRGL-220ENST00000508952 CDK5RAP1Q96SZ6 601 aaKnown RBP23.17■■□□□ 1.3
PACRGL-220ENST00000508952 MARK1Q9P0L2 795 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 PCDHB4Q9Y5E5 795 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 ABCA7Q8IZY2 2146 aa23.17■■□□□ 1.3
PACRGL-220ENST00000508952 MED19A0JLT2 244 aaPredicted RBP23.16■■□□□ 1.3
PACRGL-220ENST00000508952 O00370 1275 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 PMM2O15305 246 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 CACNG3O60359 315 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 ZBED1O96006 694 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 VDRP11473 427 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 GBP1P32455 592 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 ADIGQ0VDE8 80 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 HSF5Q4G112 596 aaPredicted RBP23.16■■□□□ 1.3
PACRGL-220ENST00000508952 EOGTQ5NDL2 527 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 FOXR2Q6PJQ5 311 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 RSRC2Q7L4I2 434 aaKnown RBP23.16■■□□□ 1.3
PACRGL-220ENST00000508952 BHLHA9Q7RTU4 235 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 ARHGAP18Q8N392 663 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 ZNF513Q8N8E2 541 aaPredicted RBP23.16■■□□□ 1.3
PACRGL-220ENST00000508952 LMO3Q8TAP4 145 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 TFAP2BQ92481 460 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 P2RY11Q96G91 374 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 SMOC1Q9H4F8 434 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 PLK2Q9NYY3 685 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 WDR35Q9P2L0 1181 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 HCN2Q9UL51 889 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 LAMA1P25391 3075 aa23.16■■□□□ 1.3
PACRGL-220ENST00000508952 THADAQ6YHU6 1953 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 CALCAP01258 141 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 COG7P83436 770 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 ELF2Q15723 593 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 CAMK4Q16566 473 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 PREPLQ4J6C6 727 aaPredicted RBP23.15■■□□□ 1.3
PACRGL-220ENST00000508952 USP39Q53GS9 565 aaKnown RBP23.15■■□□□ 1.3
PACRGL-220ENST00000508952 PM20D1Q6GTS8 502 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 TOGARAM2Q6ZUX3 1019 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 RRAGAQ7L523 313 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 ARHGEF19Q8IW93 802 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 TRIM59Q8IWR1 403 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 XPO6Q96QU8 1125 aaKnown RBP23.15■■□□□ 1.3
PACRGL-220ENST00000508952 SRRTQ9BXP5 876 aaKnown RBP23.15■■□□□ 1.3
PACRGL-220ENST00000508952 LRRC4Q9HBW1 653 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 MARCH2Q9P0N8 246 aa23.15■■□□□ 1.3
PACRGL-220ENST00000508952 SPTBN2O15020 2390 aa23.14■■□□□ 1.3
PACRGL-220ENST00000508952 DCDC2BA2VCK2 349 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 RNF225M0QZC1 329 aaPredicted RBP23.14■■□□□ 1.29
PACRGL-220ENST00000508952 ALDH1A2O94788 518 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 BCKDHBP21953 392 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 CORO1AP31146 461 aaKnown RBP23.14■■□□□ 1.29
PACRGL-220ENST00000508952 CETN1Q12798 172 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 KCNH2Q12809 1159 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 NUDT18Q6ZVK8 323 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 NETO1Q8TDF5 533 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 HMGB4Q8WW32 186 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 ZSWIM1Q9BR11 485 aa23.14■■□□□ 1.29
PACRGL-220ENST00000508952 POLMQ9NP87 494 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms