RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 KLHDC10Q6PID8 442 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 MTHFD1LQ6UB35 978 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 Q6ZRM9 215 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 ANKS3Q6ZW76 656 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 PLPPR4Q7Z2D5 763 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 HERC6Q8IVU3 1022 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 CCDC60Q8IWA6 550 aaPredicted RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 KIAA0319LQ8IZA0 1049 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 METTL13Q8N6R0 699 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 SLC25A43Q8WUT9 341 aaPredicted RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 WASF1Q92558 559 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 CDC6Q99741 560 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 GPR87Q9BY21 358 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 SLC6A15Q9H2J7 730 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 MTIF3Q9H2K0 278 aaKnown RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 ZNF302Q9NR11 478 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 TBC1D22BQ9NU19 505 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 PTGFRNQ9P2B2 879 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 DDX25Q9UHL0 483 aaKnown RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 TCEAL9Q9UHQ7 104 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 TUBE1Q9UJT0 475 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 GINS2Q9Y248 185 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 ASB1Q9Y576 335 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 PCDHA10Q9Y5I2 948 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 CDY2AQ9Y6F7 541 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 XIRP2A4UGR9 3374 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 STK36Q9NRP7 1315 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ABHD14A-ACY1A0A1B0GW23 586 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 MBLAC1A4D2B0 266 aaPredicted RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 EPOPA6NHQ4 379 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ZNF561-AS1K7EIQ3 104 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ENPP3O14638 875 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 HBP1O60381 514 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 CSDE1O75534 798 aaKnown RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 PSMD10O75832 226 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 STBD1O95210 358 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 VTNP04004 478 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 CA3P07451 260 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 PFKMP08237 780 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 MMEP08473 750 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 XBP1P17861 261 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 CD52P31358 61 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 KRT2P35908 639 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 DNM2P50570 870 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 CLCN3P51790 818 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 MRPS6P82932 125 aaKnown RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 TAP1Q03518 808 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 RBL2Q08999 1139 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 TRIM29Q14134 588 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ZNF174Q15697 407 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ELAVL1Q15717 326 aaKnown RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 MBNL2Q5VZF2 373 aaKnown RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 KRT40Q6A162 431 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 GALNT17Q6IS24 598 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 EFCAB12Q6NXP0 572 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 FAM111BQ6SJ93 734 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 MIER3Q7Z3K6 550 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 MRGPREQ86SM8 312 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 RSPH3Q86UC2 560 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 RTN4RL1Q86UN2 441 aaPredicted RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 ZC3H7AQ8IWR0 971 aaKnown RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 DIS3L2Q8IYB7 885 aaKnown RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 LRRC71Q8N4P6 559 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 SLC17A8Q8NDX2 589 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ETNPPLQ8TBG4 499 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ATP8B4Q8TF62 1192 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ARNTL2Q8WYA1 636 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 UBXN4Q92575 508 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 SEPT8Q92599 483 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 GCDHQ92947 438 aaPredicted RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 GFM2Q969S9 779 aaKnown RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 ZNF669Q96BR6 464 aaPredicted RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 SLC7A6OSQ96CW6 309 aaPredicted RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 C8orf76Q96K31 380 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ZSCAN31Q96LW9 406 aaPredicted RBP5.07□□□□□ -1.6
NUP54-206ENST00000508465 MBOAT7Q96N66 472 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 GBP4Q96PP9 640 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 RIT2Q99578 217 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 TEKT3Q9BXF9 490 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 SLC28A3Q9HAS3 691 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 NRBP2Q9NSY0 501 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 RGL1Q9NZL6 768 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 ZNHIT2Q9UHR6 403 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 PACSIN3Q9UKS6 424 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 MTUS1Q9ULD2 1270 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 STXBP5LQ9Y2K9 1186 aa5.07□□□□□ -1.6
NUP54-206ENST00000508465 EMSYQ7Z589 1322 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 CCDC66A2RUB6 948 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 GOLGA6L6A8MZA4 724 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 KIF28PB7ZC32 967 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 SCDO00767 359 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 KCNK3O14649 394 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 MAFO75444 373 aaPredicted RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 C22orf31O95567 290 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 LMNAP02545 664 aaKnown RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 MMP1P03956 469 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 FOSL2P15408 326 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 FGFR4P22455 802 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 IL12RB1P42701 662 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms