RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CRTAMO95727 393 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 EGFRP00533 1210 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 ZNF23P17027 643 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 ACO1P21399 889 aaKnown RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 QARSP47897 775 aaKnown RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 HIRAP54198 1017 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 PEX3P56589 373 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 DPYSL3Q14195 570 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 PDCD4Q53EL6 469 aaKnown RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 METTL21CQ5VZV1 264 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 DCUN1D2Q6PH85 259 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 PATL1Q86TB9 770 aaKnown RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 TICAM1Q8IUC6 712 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 GPC2Q8N158 579 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 PPP4R1Q8TF05 950 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 GMLQ99445 158 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■■■ 94.8
SCLT1-208ENST00000506368 BARX2Q9UMQ3 279 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 CEPT1Q9Y6K0 416 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 TCRBV5S1A1TA0A578 114 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 GLTPD2A6NH11 291 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 MEI4A8MW99 385 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 APOC4-APOC2K7ER74 178 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 MCF2LO15068 1137 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 SLC16A4O15374 487 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 PDE5AO76074 875 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 APOC2P02655 101 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 SLC5A2P31639 672 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 GALK1P51570 392 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 TUBA4AP68366 448 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 DMP1Q13316 513 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 CUL2Q13617 745 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 ADGRE1Q14246 886 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 SH3D19Q5HYK7 790 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 LLGL2Q6P1M3 1020 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 DUS1LQ6P1R4 473 aaKnown RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 KLHL35Q6PF15 583 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 TRIM67Q6ZTA4 783 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 TMEM161BQ8NDZ6 487 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 PPP1R14CQ8TAE6 165 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 MPHOSPH6Q99547 160 aaKnown RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 MXRA8Q9BRK3 442 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 NTPCRQ9BSD7 190 aaKnown RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 MRPL11Q9Y3B7 192 aaKnown RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 hCG_2014768A0A024R1R8 64 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 H0YCG3 227 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 NDUFB10O96000 172 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 C1QAP02745 245 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 ITGAXP20702 1163 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 GABRB2P47870 512 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 BASP1P80723 227 aaKnown RBP16.43■□□□□ 0.22
SCLT1-208ENST00000506368 MYBPC1Q00872 1141 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 KCNJ11Q14654 390 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 ZACNQ401N2 412 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 C4orf19Q8IY42 314 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 DEFB107AQ8IZN7 70 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 FNIP1Q8TF40 1166 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 ITPKCQ96DU7 683 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 EBF4Q9BQW3 602 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 ANKEF1Q9NU02 776 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 UBAP1Q9NZ09 502 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 TUBGCP4Q9UGJ1 667 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 TTLL3Q9Y4R7 772 aa16.43■□□□□ 0.22
SCLT1-208ENST00000506368 KANSL1LA0AUZ9 987 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 C3orf70A6NLC5 250 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-208ENST00000506368 ADCY3O60266 1144 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 KITP10721 976 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 GDF10P55107 478 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 CNTN2Q02246 1040 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 GAD2Q05329 585 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 RALGPS1Q5JS13 557 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 RWDD4Q6NW29 188 aaKnown RBP16.42■□□□□ 0.22
SCLT1-208ENST00000506368 TATDN1Q6P1N9 297 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 C16orf89Q6UX73 402 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PPM1NQ8N819 430 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 MECRQ9BV79 373 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 KLC2Q9H0B6 622 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PCDHB4Q9Y5E5 795 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 SLC22A2O15244 555 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 CST8O60676 142 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 CFBP00751 764 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 ARP10275 920 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 RPL7AP62424 266 aaKnown RBP16.42■□□□□ 0.22
SCLT1-208ENST00000506368 ZNF252P-AS1Q0IIN9 211 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PDAP1Q13442 181 aaKnown RBP16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PSMD6Q15008 389 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 C2CD6Q53TS8 623 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PDPK2PQ6A1A2 396 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 LRRC8BQ6P9F7 803 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 C4orf22Q6V702 233 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 CYS1Q717R9 158 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 CTAGE3PQ8IX95 158 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 MICALL2Q8IY33 904 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PRPF31Q8WWY3 499 aaKnown RBP16.42■□□□□ 0.22
SCLT1-208ENST00000506368 POMGNT1Q8WZA1 660 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 PRPF18Q99633 342 aaKnown RBP16.42■□□□□ 0.22
SCLT1-208ENST00000506368 NUF2Q9BZD4 464 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
SCLT1-208ENST00000506368 TOPORSQ9NS56 1045 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms