RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 KRT82Q9NSB4 513 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 DNAJC17Q9NVM6 304 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 CCND3P30281 292 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 CD52P31358 61 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 SCNN1GP51170 649 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 LPIN1Q14693 890 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 TRIM71Q2Q1W2 868 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 SLC45A4Q5BKX6 768 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 CYP4F22Q6NT55 531 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 CLEC4CQ8WTT0 213 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 LRRC39Q96DD0 335 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 PGAP3Q96FM1 320 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 NSRP1Q9H0G5 558 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 USP29Q9HBJ7 922 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 PPANQ9NQ55 473 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 CRTAC1Q9NQ79 661 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 RNF19AQ9NV58 838 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 XPO7Q9UIA9 1087 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 F9P00740 461 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 GSTA2P09210 222 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 TYMPP19971 482 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 BASP1P80723 227 aaKnown RBP17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 KCNJ11Q14654 390 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 CCDC38Q502W7 563 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 UBAP2Q5T6F2 1119 aaKnown RBP17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 C1orf228Q6PIY5 440 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 BEND5Q7L4P6 421 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 ATXN2LQ8WWM7 1075 aaKnown RBP17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 CSPG4P5Q96PW8 444 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 LPIN3Q9BQK8 851 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 VPS37BQ9H9H4 285 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 CSNK1G1Q9HCP0 422 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 M0QZQ0 153 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 GCATO75600 419 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 AP1G2O75843 785 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 EOMESO95936 686 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 GHRP10912 638 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 TKTL1P51854 596 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 PPP6R3Q5H9R7 873 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 EFHC2Q5JST6 749 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 ARHGEF18Q6ZSZ5 1173 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 PDZD4Q76G19 769 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 YTHDF3Q7Z739 585 aaKnown RBP17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 ZC3H18Q86VM9 953 aaKnown RBP17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 MCUQ8NE86 351 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 QKIQ96PU8 341 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 ZIC5Q96T25 663 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 NAALADL1Q9UQQ1 740 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 THSD7BQ9C0I4 1608 aa17.94■□□□□ 0.46
TRAPPC11-204ENST00000505676 KCNN4O15554 427 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 DAOAP59103 153 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 SCAPQ12770 1279 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 TRIM32Q13049 653 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 CA9Q16790 459 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 DCLRE1AQ6PJP8 1040 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 NPNTQ6UXI9 565 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 THEM5Q8N1Q8 247 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 SGSM3Q96HU1 749 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 GLT1D1Q96MS3 346 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 PWWP2AQ96N64 755 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 KCTD15Q96SI1 283 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 SSU72Q9NP77 194 aaKnown RBP17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 GPATCH2LQ9NWQ4 482 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 MIOSQ9NXC5 875 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 MTMR10Q9NXD2 777 aa17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 PSMC3IPQ9P2W1 217 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC11-204ENST00000505676 ATP2C2O75185 946 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 STK10O94804 968 aaKnown RBP17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 ACAT1P24752 427 aaKnown RBP17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 ACLYP53396 1101 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 ARHGEF6Q15052 776 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 RAB6CQ53S08 254 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 DCAF6Q58WW2 860 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 FAM171BQ6P995 826 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 SRLQ86TD4 932 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 LPPQ93052 612 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 PCED1BQ96HM7 432 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 ADAM2Q99965 735 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 RAB6CQ9H0N0 254 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 NKIRAS1Q9NYS0 192 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 SMG5Q9UPR3 1016 aaKnown RBP17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 HEY1Q9Y5J3 304 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 MEIS3P2A8K0S8 358 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 HCAR3P49019 387 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 MAP3K7CLP57077 242 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 GEMIN4P57678 1058 aaKnown RBP17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 CDK16Q00536 496 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 DEUP1Q05D60 604 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 ARL13BQ3SXY8 428 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 ECHDC2Q86YB7 292 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 PALM2Q8IXS6 379 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 CCDC13Q8IYE1 715 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 MAML1Q92585 1016 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 ACSS3Q9H6R3 686 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 USP3Q9Y6I4 520 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 CLUHO75153 1309 aa17.92■□□□□ 0.46
TRAPPC11-204ENST00000505676 CAPN9O14815 690 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 COL6A1P12109 1028 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 TPSB2P20231 275 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 TPSAB1Q15661 275 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms