RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SMG7Q92540 1137 aaKnown RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 FGF13Q92913 245 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 FAF2Q96CS3 445 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 SLC22A12Q96S37 553 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 SEPT5Q99719 369 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 ANLNQ9NQW6 1124 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 SALL4Q9UJQ4 1053 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 ADGRG1Q9Y653 693 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 ARHGAP6O43182 974 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 USP17L7P0C7H9 530 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 PCK1P35558 622 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 VEPH1Q14D04 833 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 FAM78AQ5JUQ0 283 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 SDHAF4Q5VUM1 108 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 AFMIDQ63HM1 303 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 C12orf76Q8N812 135 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 CHRDQ9H2X0 955 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 CLDND1Q9NY35 253 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 ANKRD36A6QL64 1941 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 SOWAHDA6NJG2 315 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 C3orf70A6NLC5 250 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 WASH4PA8MWX3 477 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 IBSPP21815 317 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 PTPN7P35236 360 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 GALCP54803 685 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 BSPRYQ5W0U4 402 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 ALKBH5Q6P6C2 394 aaKnown RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 VITQ6UXI7 678 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 GIPC2Q8TF65 315 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 BAG1Q99933 345 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 PARVAQ9NVD7 372 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 E2F8A0AVK6 867 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 FTLP02792 175 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 YWHAZP63104 245 aaKnown RBP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 TEAD2Q15562 447 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 SYPL2Q5VXT5 272 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 MMS22LQ6ZRQ5 1243 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 MED10Q9BTT4 135 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 THAP2Q9H0W7 228 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 THEGQ9P2T0 379 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 CDH22Q9UJ99 828 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 NR2E1Q9Y466 385 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 EPN1Q9Y6I3 576 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 DRGXA6NNA5 263 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 C2CD4DB7Z1M9 353 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 RRM1P23921 792 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 ELF1P32519 619 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 HTR7P34969 479 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 VAV2P52735 878 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 HDAC4P56524 1084 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 NTHL1P78549 312 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 MTF1Q14872 753 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 TAF5Q15542 800 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 STXBP5Q5T5C0 1151 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 ERICH1Q86X53 443 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 DDX42Q86XP3 938 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 MFSD6LQ8IWD5 586 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 ELMOD1Q8N336 334 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 STKLD1Q8NE28 680 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 JOSD2Q8TAC2 188 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 SMARCD2Q92925 531 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 WBP2Q969T9 261 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 OTUB2Q96DC9 234 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 PACSIN1Q9BY11 444 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 PPARGC1AQ9UBK2 798 aaKnown RBP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 SCINQ9Y6U3 715 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 PRAMEF12O95522 483 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 PENKP01210 267 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 FLT3P36888 993 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 KPNA1P52294 538 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 GPC5P78333 572 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 TNK2Q07912 1038 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 FAM133BQ5BKY9 247 aaKnown RBP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 BRMS1LQ5PSV4 323 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 REXO1L1PQ8IX06 675 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 DQX1Q8TE96 717 aaKnown RBP8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 TEKT4Q8WW24 435 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 PLA2G2FQ9BZM2 168 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 OSBPL2Q9H1P3 480 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 CCSER2Q9H7U1 834 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 ADAMTS1Q9UHI8 967 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 PCDHA13Q9Y5I0 950 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 STC2O76061 302 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 RARGP13631 454 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 TNFAIP3P21580 790 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 HECTD3Q5T447 861 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 LRRC38Q5VT99 294 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 NADSYN1Q6IA69 706 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 TOGARAM2Q6ZUX3 1019 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 GPR152Q8TDT2 470 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 MICAL1Q8TDZ2 1067 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 DNASE1L2Q92874 299 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 FBXO32Q969P5 355 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 VOPP1Q96AW1 172 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 MSANTD3Q96H12 275 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 HAPLN3Q96S86 360 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 PRDM6Q9NQX0 595 aa8.66□□□□□ -1.02
CDC42SE2-208ENST00000505065 HOXC11O43248 304 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms