RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PDZD8Q8NEN9 1154 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 SVIPQ8NHG7 77 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 NRG4Q8WWG1 115 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 LPIN3Q9BQK8 851 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 POLR3FQ9H1D9 316 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 GPRC5CQ9NQ84 441 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 BMP2KQ9NSY1 1161 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 ABI2Q9NYB9 513 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 MTRF1LQ9UGC7 380 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 IFT52Q9Y366 437 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 RBMX2Q9Y388 322 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 PCDHGA3Q9Y5H0 932 aa9.97□□□□□ -0.81
PDLIM5-207ENST00000503974 NPHP3-ACAD11A0A0J9YXS1 232 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 TRIM64A6NGJ6 449 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 TRIM64BA6NI03 449 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 SYCE1LA8MT33 242 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 KLRC4O43908 158 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 OR6B1O95007 311 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 KLHL2O95198 593 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 OAS1P00973 400 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 CLTBP09497 229 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 GLRA2P23416 452 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 GRIA2P42262 883 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 CLK3P49761 638 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 DNM2P50570 870 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 ZNF135P52742 658 aaPredicted RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 AP1B1Q10567 949 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 DPYDQ12882 1025 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 SGO2Q562F6 1265 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 PPP4R4Q6NUP7 873 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 INTS8Q75QN2 995 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 RAVER1Q8IY67 606 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 GRAMD1CQ8IYS0 662 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 METTL13Q8N6R0 699 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 FAM13CQ8NE31 585 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 SPATA20Q8TB22 786 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 DNAJB3Q8WWF6 145 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 PSPC1Q8WXF1 523 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 STAMQ92783 540 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 TMEM143Q96AN5 459 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 INTS12Q96CB8 462 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 CAPZA3Q96KX2 299 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 FIZ1Q96SL8 496 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 ELAC2Q9BQ52 826 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 HINFPQ9BQA5 517 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 HTATIP2Q9BUP3 242 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 NOC4LQ9BVI4 516 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 NFKBIZQ9BYH8 718 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 SIRT5Q9NXA8 310 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 KCNN3Q9UGI6 736 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 NOD1Q9Y239 953 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 ATP11BQ9Y2G3 1177 aa9.96□□□□□ -0.81
PDLIM5-207ENST00000503974 PVALEFA0A1B0GWK0 134 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 SFI1A8K8P3 1242 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 RSPH10B2B2RC85 870 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 KIAA0355O15063 1070 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 SNPHO15079 494 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ALOX15BO15296 676 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 GPR32O75388 356 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 FUCA1P04066 466 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 RSPH10BP0C881 870 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 NAMPTP43490 491 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 AFMP43652 599 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 VAV2P52735 878 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 IST1P53990 364 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 MRPS6P82932 125 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 CDC42EP1Q00587 391 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 KCNC4Q03721 635 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 MXD4Q14582 209 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 CCDC58Q4VC31 144 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 VWA3BQ502W6 1294 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM102BQ5T8I3 360 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 NIPAL1Q6NVV3 410 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 DSTYKQ6XUX3 929 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 SATL1Q86VE3 508 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ZNF410Q86VK4 478 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 AGGF1Q8N302 714 aaeCLIP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ANKRD53Q8N9V6 530 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 BBOF1Q8ND07 529 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 PRPF31Q8WWY3 499 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 BSNDQ8WZ55 320 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 METTL2AQ96IZ6 378 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 VPS35Q96QK1 796 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 GPATCH1Q9BRR8 931 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 NTPCRQ9BSD7 190 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ADAMTS10Q9H324 1103 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 SIAEQ9HAT2 523 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 PALMDQ9NP74 551 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 FANCFQ9NPI8 374 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 CD93Q9NPY3 652 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 WASH6PQ9NQA3 447 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 RWDD3Q9Y3V2 267 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 SPEF1Q9Y4P9 236 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 COL4A3BPQ9Y5P4 624 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 H3BUI4 141 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 YKT6O15498 198 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 AQP9O43315 295 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 SHBGP04278 402 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 CKBP12277 381 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms