RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 C11orf16Q9NQ32 467 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 HPS4Q9NQG7 708 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 RASAL2Q9UJF2 1139 aa26.27■■□□□ 1.8
LSM6-202ENST00000502781 HNRNPH3P31942 346 aaKnown RBP26.26■■□□□ 1.79
LSM6-202ENST00000502781 SCNN1AP37088 669 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 MLLT6P55198 1093 aaPredicted RBP26.26■■□□□ 1.79
LSM6-202ENST00000502781 COG7P83436 770 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 SLC6A3Q01959 620 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 ARID5BQ14865 1188 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 PDGFRLQ15198 375 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 SLC44A4Q53GD3 710 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 OR6B2Q6IFH4 312 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 TOGARAM2Q6ZUX3 1019 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 HTR3DQ70Z44 454 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 ZNF571Q7Z3V5 609 aaPredicted RBP26.26■■□□□ 1.79
LSM6-202ENST00000502781 XYLT1Q86Y38 959 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 MIB1Q86YT6 1006 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 SYNCQ9H7C4 482 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 POPDC2Q9HBU9 364 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 FBXL21Q9UKT6 434 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 WNT6Q9Y6F9 365 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 COL4A2P08572 1712 aa26.26■■□□□ 1.79
LSM6-202ENST00000502781 F5P12259 2224 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 KRBA1A5PL33 1030 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 KLHL30Q0D2K2 578 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 PTP4A2Q12974 167 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 EML3Q32P44 896 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 PHF13Q86YI8 300 aaPredicted RBP26.25■■□□□ 1.79
LSM6-202ENST00000502781 MSANTD4Q8NCY6 345 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 TTC16Q8NEE8 873 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 SLC2A13Q96QE2 648 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 LINC00597Q9H2U6 94 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 ARHGEF3Q9NR81 526 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 DUS2Q9NX74 493 aaKnown RBP26.25■■□□□ 1.79
LSM6-202ENST00000502781 STRIP2Q9ULQ0 834 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 NAALADL1Q9UQQ1 740 aa26.25■■□□□ 1.79
LSM6-202ENST00000502781 TMEM221A6NGB7 291 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 M0R296 226 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 HSF2BPO75031 334 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 STC2O76061 302 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 NCAM1P13591 858 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 TNK2Q07912 1038 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 GOLGA8FQ08AF8 430 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 GOLGA8DPQ0D2H9 430 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 C2CD6Q53TS8 623 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 SYPL2Q5VXT5 272 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 TRIM68Q6AZZ1 485 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 Q6ZNB5 142 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 SLC30A5Q8TAD4 765 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 MRFAP1L1Q96HT8 127 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 DNAJC7Q99615 494 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 HEBP1Q9NRV9 189 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 GTSE1Q9NYZ3 720 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 TBC1D14Q9P2M4 693 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 SFMBT1Q9UHJ3 866 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 SH3BP1Q9Y3L3 701 aa26.24■■□□□ 1.79
LSM6-202ENST00000502781 HBS1LQ9Y450 684 aaKnown RBP26.24■■□□□ 1.79
LSM6-202ENST00000502781 BZW2Q9Y6E2 419 aaKnown RBP26.24■■□□□ 1.79
LSM6-202ENST00000502781 SHISA7A6NL88 538 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 SLC9A3R1O14745 358 aaPredicted RBP26.23■■□□□ 1.79
LSM6-202ENST00000502781 IRF1P10914 325 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 SKILP12757 684 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 NSFP46459 744 aaKnown RBP26.23■■□□□ 1.79
LSM6-202ENST00000502781 IFNAR2P48551 515 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 ZNF75DP51815 510 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 GSCP56915 257 aaPredicted RBP26.23■■□□□ 1.79
LSM6-202ENST00000502781 TBX2Q13207 712 aaPredicted RBP26.23■■□□□ 1.79
LSM6-202ENST00000502781 RUNX3Q13761 415 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 TRIP4Q15650 581 aaPredicted RBP26.23■■□□□ 1.79
LSM6-202ENST00000502781 MLF2Q15773 248 aaPredicted RBP26.23■■□□□ 1.79
LSM6-202ENST00000502781 MMS22LQ6ZRQ5 1243 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 BMP8AQ7Z5Y6 402 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 ADGRG2Q8IZP9 1017 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 SIX5Q8N196 739 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 DQX1Q8TE96 717 aaKnown RBP26.23■■□□□ 1.79
LSM6-202ENST00000502781 OTUB2Q96DC9 234 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 EBF3Q9H4W6 596 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 CA14Q9ULX7 337 aa26.23■■□□□ 1.79
LSM6-202ENST00000502781 SLC12A8A0AV02 714 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 OTOL1A6NHN0 477 aaPredicted RBP26.22■■□□□ 1.79
LSM6-202ENST00000502781 GPR37L1O60883 481 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 GLULP15104 373 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 ARSAP15289 507 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 TNFAIP3P21580 790 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 STARD6P59095 220 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 PRKCQQ04759 706 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 MON1BQ7L1V2 547 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 CSGALNACT1Q8TDX6 532 aa26.22■■□□□ 1.79
LSM6-202ENST00000502781 DDX23Q9BUQ8 820 aaKnown RBP26.22■■□□□ 1.79
LSM6-202ENST00000502781 SEPT11Q9NVA2 429 aaKnown RBP26.22■■□□□ 1.79
LSM6-202ENST00000502781 FAM170AA1A519 330 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 DDX3XO00571 662 aaKnown RBP eCLIP26.21■■□□□ 1.791e-8■■■■□ 19.9
LSM6-202ENST00000502781 DAB1O75553 588 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 IGLV3-25P01717 112 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 IGLV3-27P01718 113 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 KLKB1P03952 638 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 SERPING1P05155 500 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 NNTQ13423 1086 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 ITPRIPL2Q3MIP1 535 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 BBS7Q8IWZ6 715 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms