RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CCDC144BQ3MJ40 725 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 IFI44LQ53G44 452 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZC3H12BQ5HYM0 836 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 RPUSD3Q6P087 351 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 SH2D5Q6ZV89 423 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GAREM2Q75VX8 874 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TREML1Q86YW5 311 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PRSS35Q8N3Z0 413 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CTCFLQ8NI51 663 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 GIPC3Q8TF64 312 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 LARP4BQ92615 738 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 MUL1Q969V5 352 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ASB16Q96NS5 453 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 RPS6KC1Q96S38 1066 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CORO1BQ9BR76 489 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GTPBP4Q9BZE4 634 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 ADAM19Q9H013 955 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CCDC113Q9H0I3 377 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SMG9Q9H0W8 520 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 CDIP1Q9H305 208 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GREM2Q9H772 168 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 RMI1Q9H9A7 625 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 VIPAS39Q9H9C1 493 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SERHLQ9NQF3 203 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SPTLC3Q9NUV7 552 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 OGFRQ9NZT2 677 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 UBQLN2Q9UHD9 624 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZMIZ1Q9ULJ6 1067 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SIT1Q9Y3P8 196 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SNX11Q9Y5W9 270 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 WNK3Q9BYP7 1800 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 COL6A5A8TX70 2615 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TRAV23DV6A0A075B6W5 121 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 MAGEB16A2A368 324 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 H3BRJ5 948 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 DLGAP1O14490 977 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 DDX3YO15523 660 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 USP2O75604 605 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 ONECUT2O95948 504 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 OPN1LWP04000 364 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CTSLP07711 333 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CLEC2LP0C7M8 214 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PAMP19021 973 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TNFRSF8P28908 595 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CYP2C19P33261 490 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 NPBWR1P48145 328 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GSSP48637 474 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CAV2P51636 162 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 XKP51811 444 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 COPB1P53618 953 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 SCAND1P57086 179 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 RAB10P61026 200 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ASIC1P78348 528 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TSPAN31Q12999 210 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FRG1Q14331 258 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 GGTLC2Q14390 218 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 MIDNQ504T8 468 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FFAR4Q5NUL3 377 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 RARS2Q5T160 578 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 TTC19Q6DKK2 380 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 PLEKHA7Q6IQ23 1121 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TAF2Q6P1X5 1199 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PLXDC2Q6UX71 529 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 LINC00114Q6XXX2 140 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 COLCA1Q6ZS62 124 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 USP50Q70EL3 339 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 CALHM3Q86XJ0 350 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 XYLT1Q86Y38 959 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SLC44A2Q8IWA5 706 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 GJD3Q8N144 294 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 KDM8Q8N371 416 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GBP7Q8N8V2 638 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 C19orf47Q8N9M1 422 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 OR5K2Q8NHB8 316 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ATL2Q8NHH9 583 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TMEM171Q8WVE6 324 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GFM2Q969S9 779 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 CASD1Q96PB1 797 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 NUDCD1Q96RS6 583 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ACOX2Q99424 681 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SYT3Q9BQG1 590 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.52□□□□□ -2.172e-6■■□□□ 13.2
XRN1-214ENST00000498077 CBWD1Q9BRT8 395 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 JAM3Q9BX67 310 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ACE2Q9BYF1 805 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 KCNJ16Q9NPI9 418 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZC4H2Q9NQZ6 224 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 RTEL1Q9NZ71 1219 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 NCKIPSDQ9NZQ3 722 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TAAR2Q9P1P5 351 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CFDP1Q9UEE9 299 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 TINAGQ9UJW2 476 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 B3GALT1Q9Y5Z6 326 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 F8P00451 2351 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GAKO14976 1311 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 RPGRIP1LQ68CZ1 1315 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 USP17L15C9J2P7 530 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 USP17L10C9JJH3 530 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 USP17L13C9JLJ4 530 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 USP17L12C9JPN9 530 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms