RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RCCD1A6NED2 376 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 GRXCR2A6NFK2 248 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 MSI1O43347 362 aaKnown RBP14.18□□□□□ -0.14
CPNE1-227ENST00000498056 COCHO43405 550 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 MBTPS2O43462 519 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 DESP17661 470 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 GPD1P21695 349 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 SDC4P31431 198 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 GBP2P32456 591 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-227ENST00000498056 RPL7AP62424 266 aaKnown RBP14.18□□□□□ -0.14
CPNE1-227ENST00000498056 EFEMP1Q12805 493 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 MAMLD1Q13495 774 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 PPP1R15BQ5SWA1 713 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 SYPL2Q5VXT5 272 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 TRNP1Q6NT89 227 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 TAC4Q86UU9 113 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 MIB1Q86YT6 1006 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 NPAS3Q8IXF0 933 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 RHOT2Q8IXI1 618 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 ADAM32Q8TC27 787 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 DQX1Q8TE96 717 aaKnown RBP14.18□□□□□ -0.14
CPNE1-227ENST00000498056 CFAP57Q96MR6 1250 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 CDK5RAP1Q96SZ6 601 aaKnown RBP14.18□□□□□ -0.14
CPNE1-227ENST00000498056 TRIM7Q9C029 511 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 OSGEPQ9NPF4 335 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 PRDM6Q9NQX0 595 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 SMPD4Q9NXE4 827 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 TMEM59LQ9UK28 342 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 PYCARDQ9ULZ3 195 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 COG5Q9UP83 839 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 COL4A3Q01955 1670 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-227ENST00000498056 A0A0U1RQJ8 604 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 SIGLEC16A6NMB1 481 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 TMEM110-MUSTN1A8MSY1 372 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 CCP110O43303 1012 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 FYNP06241 537 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 IRF1P10914 325 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 PSMA2P25787 234 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 DDX6P26196 483 aaKnown RBP eCLIP14.17□□□□□ -0.14
CPNE1-227ENST00000498056 RFC1P35251 1148 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-227ENST00000498056 AVPR1AP37288 418 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 MATKP42679 507 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 NOP2P46087 812 aaKnown RBP14.17□□□□□ -0.14
CPNE1-227ENST00000498056 PITX1P78337 314 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-227ENST00000498056 ATP11AP98196 1134 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 TFF2Q03403 129 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 KIF5AQ12840 1032 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 C15orf59Q2T9L4 293 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-227ENST00000498056 SNX30Q5VWJ9 437 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 MSANTD2Q6P1R3 559 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 ARL14EPQ8N8R7 260 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-227ENST00000498056 RXFP2Q8WXD0 754 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 ATRIPQ8WXE1 791 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 FGF13Q92913 245 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 BTBD6Q96KE9 485 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 SLC22A12Q96S37 553 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 SMG9Q9H0W8 520 aaKnown RBP14.17□□□□□ -0.14
CPNE1-227ENST00000498056 SMOC2Q9H3U7 446 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 TASP1Q9H6P5 420 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 LZTFL1Q9NQ48 299 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 DDIT4Q9NX09 232 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 THEGQ9P2T0 379 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 UVRAGQ9P2Y5 699 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 TRIM10Q9UDY6 481 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 SFMBT1Q9UHJ3 866 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 PPP2R2CQ9Y2T4 447 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 MYOFQ9NZM1 2061 aa14.17□□□□□ -0.14
CPNE1-227ENST00000498056 DOCK4Q8N1I0 1966 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 MACROD2A1Z1Q3 448 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 C2CD4BA6NLJ0 364 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 PRAMEF12O95522 483 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 TBX18O95935 607 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 HMBSP08397 361 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 PDGFRAP16234 1089 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 TFE3P19532 575 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-227ENST00000498056 NOS2P35228 1153 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 ATP5C1P36542 298 aaKnown RBP14.16□□□□□ -0.14
CPNE1-227ENST00000498056 NAP1L1P55209 391 aaKnown RBP14.16□□□□□ -0.14
CPNE1-227ENST00000498056 OGDHQ02218 1023 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 NME3Q13232 169 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 LEXMQ3ZCV2 418 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 ARHGAP29Q52LW3 1261 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 OTUD1Q5VV17 481 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-227ENST00000498056 PTCRAQ6ISU1 281 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-227ENST00000498056 TDRD5Q8NAT2 981 aaKnown RBP14.16□□□□□ -0.14
CPNE1-227ENST00000498056 ZSCAN18Q8TBC5 510 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-227ENST00000498056 SLC35G2Q8TBE7 412 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 SUSD6Q92537 303 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 KHSRPQ92945 711 aaKnown RBP eCLIP14.16□□□□□ -0.14
CPNE1-227ENST00000498056 SERPINB11Q96P15 392 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 TBCBQ99426 244 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 TSGA10Q9BZW7 698 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 LACRTQ9GZZ8 138 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 MARCH2Q9P0N8 246 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 DNMT3LQ9UJW3 386 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 CDH7Q9ULB5 785 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 CPQQ9Y646 472 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 XIRP2A4UGR9 3374 aa14.16□□□□□ -0.14
CPNE1-227ENST00000498056 A0A0A6YYK5 440 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms