RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 CSNK1EP49674 416 aaKnown RBP17.45■□□□□ 0.38
VIM-208ENST00000497849 PGFP49763 221 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 CASP5P51878 434 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 KIF19Q2TAC6 998 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 TPGS1Q6ZTW0 290 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 HTR3DQ70Z44 454 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 NOC3LQ8WTT2 800 aaKnown RBP17.45■□□□□ 0.38
VIM-208ENST00000497849 P2RY11Q96G91 374 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 PCIF1Q9H4Z3 704 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 IL37Q9NZH6 218 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 TBC1D7Q9P0N9 293 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 GMIPQ9P107 970 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 R3HCC1Q9Y3T6 440 aaKnown RBP17.45■□□□□ 0.38
VIM-208ENST00000497849 CKAP5Q14008 2032 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 TACC1O75410 805 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 IGLV3-19P01714 112 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 HLA-EP13747 358 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 DGKGP49619 791 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 SUZ12Q15022 739 aaKnown RBP17.44■□□□□ 0.38
VIM-208ENST00000497849 CCDC157Q569K6 752 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 OR6B3Q8NGW1 331 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 SNX25Q9H3E2 840 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 WDR35Q9P2L0 1181 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 SNX11Q9Y5W9 270 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 HECTD1Q9ULT8 2610 aa17.44■□□□□ 0.38
VIM-208ENST00000497849 FAM92AA1XBS5 289 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 OXTRP30559 389 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 IL12RB1P42701 662 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 SLC5A3P53794 718 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 ENPP2Q13822 863 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 STARD3Q14849 445 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 PCSK4Q6UW60 755 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 TMPRSS12Q86WS5 348 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 TMPRSS6Q8IU80 811 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 GPD1LQ8N335 351 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 RASSF8Q8NHQ8 419 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 ZSCAN31Q96LW9 406 aaPredicted RBP17.43■□□□□ 0.38
VIM-208ENST00000497849 FCRL3Q96P31 734 aaPredicted RBP17.43■□□□□ 0.38
VIM-208ENST00000497849 KLF16Q9BXK1 252 aaPredicted RBP17.43■□□□□ 0.38
VIM-208ENST00000497849 FGFBP2Q9BYJ0 223 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 SEL1LQ9UBV2 794 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 FBXO10Q9UK96 956 aa17.43■□□□□ 0.38
VIM-208ENST00000497849 KCNK3O14649 394 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 GCNT3O95395 438 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 TBX18O95935 607 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 CST3P01034 146 aaPredicted RBP17.42■□□□□ 0.38
VIM-208ENST00000497849 TNNC2P02585 160 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 ACO1P21399 889 aaKnown RBP17.42■□□□□ 0.38
VIM-208ENST00000497849 GRK6P43250 576 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 DUOXA2Q1HG44 320 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 PAQR9Q6ZVX9 377 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 B3GALNT2Q8NCR0 500 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 DNAJC19Q96DA6 116 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 NXPE2Q96DL1 559 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 SIPA1Q96FS4 1042 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 NACA2Q9H009 215 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 PLK2Q9NYY3 685 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 MYLKQ15746 1914 aa17.42■□□□□ 0.38
VIM-208ENST00000497849 TP53BP1Q12888 1972 aaPredicted RBP17.42■□□□□ 0.38
VIM-208ENST00000497849 COL6A6A6NMZ7 2263 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 J3QKU1 62 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 PCDHGA12O60330 932 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 TLR5O60602 858 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 FAM163BP0C2L3 166 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
VIM-208ENST00000497849 AFF3P51826 1226 aaKnown RBP17.41■□□□□ 0.38
VIM-208ENST00000497849 COPAP53621 1224 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 CLDN6P56747 220 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 LRRC69Q6ZNQ3 347 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 TRAPPC11Q7Z392 1133 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 CBWD2Q8IUF1 395 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 SYCP3Q8IZU3 236 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 BHMTQ93088 406 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 NUP58Q9BVL2 599 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 THAP10Q9P2Z0 257 aaPredicted RBP17.41■□□□□ 0.38
VIM-208ENST00000497849 ANKRD6Q9Y2G4 727 aa17.41■□□□□ 0.38
VIM-208ENST00000497849 COL5A1P20908 1838 aaPredicted RBP17.4■□□□□ 0.38
VIM-208ENST00000497849 A8MXQ7 604 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 GAP43P17677 238 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 ZNF132P52740 706 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 SEMG2Q02383 582 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 SF3A1Q15459 793 aaKnown RBP17.4■□□□□ 0.38
VIM-208ENST00000497849 FAM35AQ86V20 835 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 CACUL1Q86Y37 369 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 PRCCQ92733 491 aaPredicted RBP17.4■□□□□ 0.38
VIM-208ENST00000497849 C6orf106Q9H6K1 298 aaPredicted RBP17.4■□□□□ 0.38
VIM-208ENST00000497849 OLFML3Q9NRN5 406 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 SLC27A6Q9Y2P4 619 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 PCDHB13Q9Y5F0 798 aa17.4■□□□□ 0.38
VIM-208ENST00000497849 H0Y8X5 98 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 CAPN9O14815 690 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 CCT8P50990 548 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 CFHR1Q03591 330 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 GEN1Q17RS7 908 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 WDR72Q3MJ13 1102 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 KCNT1Q5JUK3 1230 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 LAYNQ6UX15 382 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 USP49Q70CQ1 688 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 FAM124AQ86V42 546 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms