RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TTC13Q8NBP0 860 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 KLHDC9Q8NEP7 349 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 SLC35B2Q8TB61 432 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ATG4AQ8WYN0 398 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 FAM118BQ9BPY3 351 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 QPCTLQ9NXS2 382 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 NOP53Q9NZM5 478 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ITGB1BP2Q9UKP3 347 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 SNX9Q9Y5X1 595 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 TSC2P49815 1807 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 SUN1O94901 812 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 TRUB2O95900 331 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 MYCLP1P12525 358 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 VCPP55072 806 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 MGAT5Q09328 741 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 BNIP1Q12981 228 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 CBLBQ13191 982 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 ORC1Q13415 861 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 GALNTL6Q49A17 601 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 CCSAPQ6IQ19 270 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 MRPL10Q7Z7H8 261 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 PRUNE1Q86TP1 453 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 ALLCQ8N6M5 410 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 TEKT4Q8WW24 435 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 CCDC134Q9H6E4 229 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 SYNCQ9H7C4 482 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 PCDH18Q9HCL0 1135 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 AAASQ9NRG9 546 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 A0A1B0GVG6 124 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 KPNA7A9QM74 516 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 GOLGA8SH3BPF8 625 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 OAS1P00973 400 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 ATF2P15336 505 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 KDELR1P24390 212 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 IL1R2P27930 398 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 MSH2P43246 934 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 BLMHQ13867 455 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 PPP1R26Q5T8A7 1209 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 TXNRD3NBQ6F5E7 133 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 FAM183BPQ6ZVS7 135 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 CYP4V2Q6ZWL3 525 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 SPATA18Q8TC71 538 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 C11orf84Q9BUA3 381 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 HES2Q9Y543 173 aa12.03□□□□□ -0.48
SNRNP200-208ENST00000497539 M0QZ92 97 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 BRAFP15056 766 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 SLC6A3Q01959 620 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 CCDC142Q17RM4 750 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 ATP13A4Q4VNC1 1196 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 SMUG1Q53HV7 270 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 TNFAIP8L3Q5GJ75 292 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 FAM26DQ5JW98 314 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 ANKRD52Q8NB46 1076 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 LZICQ8WZA0 190 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 TBCBQ99426 244 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 HEMGNQ9BXL5 484 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 SPC25Q9HBM1 224 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 SLC38A7Q9NVC3 462 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 ASIC3Q9UHC3 531 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 CDY2AQ9Y6F7 541 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 E5RJQ4 531 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 PTGESO14684 152 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 SPTLC1O15269 473 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 TCEA3O75764 348 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 IDO1P14902 403 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 ZFXP17010 805 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 PTPN9P43378 593 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 PSMC4P43686 418 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 BCAT1P54687 386 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 SOX4Q06945 474 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 BST2Q10589 180 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 FAM102AQ5T9C2 384 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 CGB2Q6NT52 195 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 TRNP1Q6NT89 227 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 SRRM1Q8IYB3 904 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 HACE1Q8IYU2 909 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 ARRDC4Q8NCT1 418 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 UBA3Q8TBC4 463 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 KHSRPQ92945 711 aaKnown RBP eCLIP12.02□□□□□ -0.499e-6■■■□□ 18.5
SNRNP200-208ENST00000497539 TGS1Q96RS0 853 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 ROPN1BQ9BZX4 212 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 ROPN1Q9HAT0 212 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 SPO11Q9Y5K1 396 aa12.02□□□□□ -0.49
SNRNP200-208ENST00000497539 C6orf222P0C671 652 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 RARBP10826 455 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 FGFR1P11362 822 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 AKAP5P24588 427 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 MIPP30301 263 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 ACADSBP45954 432 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 FXNQ16595 210 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 FAAH2Q6GMR7 532 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 SLC26A9Q7LBE3 791 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 ACOT1Q86TX2 421 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 ANKLE1Q8NAG6 615 aa12.01□□□□□ -0.49
SNRNP200-208ENST00000497539 CENPIQ92674 756 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms