RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 NPAS3Q8IXF0 933 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 RHOT2Q8IXI1 618 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-222ENST00000496567 NUP85Q9BW27 656 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 SLC46A2Q9BY10 475 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 CTTNBP2NLQ9P2B4 639 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 DNMT3LQ9UJW3 386 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 CDH7Q9ULB5 785 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 ZFP37Q9Y6Q3 630 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-222ENST00000496567 COCHO43405 550 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 GJB6O95452 261 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 OLFM2O95897 454 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 RFC1P35251 1148 aaPredicted RBP22.73■■□□□ 1.23
C9orf3-222ENST00000496567 FLT3P36888 993 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 AVPR1AP37288 418 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 SYPL2Q5VXT5 272 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 CMTM8Q8IZV2 173 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 EMC1Q8N766 993 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 JOSD2Q8TAC2 188 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 RFFLQ8WZ73 363 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 DDX23Q9BUQ8 820 aaKnown RBP22.73■■□□□ 1.23
C9orf3-222ENST00000496567 NUDT5Q9UKK9 219 aa22.73■■□□□ 1.23
C9orf3-222ENST00000496567 DENND4AQ7Z401 1863 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 EYSQ5T1H1 3165 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 TMEM191CA6NGB0 347 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 C2CD4BA6NLJ0 364 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 CKMP06732 381 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 CCDC175P0C221 793 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 PDGFRAP16234 1089 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 DESP17661 470 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 SDC4P31431 198 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 RPL7AP62424 266 aaKnown RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 EFEMP1Q12805 493 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 SMAD2Q15796 467 aaKnown RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 AAK1Q2M2I8 961 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 PTCRAQ6ISU1 281 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 OTOP3Q7RTS5 596 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 ARL14EPQ8N8R7 260 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 RXFP2Q8WXD0 754 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 CYP2S1Q96SQ9 504 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 RNF38Q9H0F5 515 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 USTQ9Y2C2 406 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 TBX18O95935 607 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 MBL2P11226 248 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 GPD1P21695 349 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 WEE1P30291 646 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 GBP2P32456 591 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 SLC25A52Q3SY17 297 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 SLC35G2Q8TBE7 412 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 ZNF564Q8TBZ8 553 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 DQX1Q8TE96 717 aaKnown RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 ACSF2Q96CM8 615 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-222ENST00000496567 SMOC2Q9H3U7 446 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 TMEM51Q9NW97 253 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 MARCH2Q9P0N8 246 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 THEGQ9P2T0 379 aa22.72■■□□□ 1.23
C9orf3-222ENST00000496567 A0A0A6YYK5 440 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-222ENST00000496567 PJA2O43164 708 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 GBP1P32455 592 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 SLC7A9P82251 487 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 KIF5AQ12840 1032 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 TCEAL1Q15170 157 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 FNIP1Q8TF40 1166 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 NT5C3BQ969T7 300 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 ZSWIM3Q96MP5 696 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 SERPINB11Q96P15 392 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 SLC22A12Q96S37 553 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 PHF7Q9BWX1 381 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-222ENST00000496567 PRDM6Q9NQX0 595 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 LCMT1Q9UIC8 334 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 RASAL2Q9UJF2 1139 aa22.71■■□□□ 1.23
C9orf3-222ENST00000496567 BTNL10A8MVZ5 291 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 PTPN9P43378 593 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 KPNA1P52294 538 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-222ENST00000496567 ZNF143P52747 638 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-222ENST00000496567 COG7P83436 770 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 TFF2Q03403 129 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 TRNP1Q6NT89 227 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 MIB1Q86YT6 1006 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 ZSCAN18Q8TBC5 510 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-222ENST00000496567 CFAP57Q96MR6 1250 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 MYADMQ96S97 322 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 NPY6RQ99463 290 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 SFMBT1Q9UHJ3 866 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 ANAPC7Q9UJX3 599 aa22.7■■□□□ 1.22
C9orf3-222ENST00000496567 SPTBN5Q9NRC6 3674 aaKnown RBP22.7■■□□□ 1.22
C9orf3-222ENST00000496567 XIRP2A4UGR9 3374 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 RCCD1A6NED2 376 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 MYO1FO00160 1098 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 DPYSL4O14531 572 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 MDM4O15151 490 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 TRUB2O95900 331 aaKnown RBP22.69■■□□□ 1.22
C9orf3-222ENST00000496567 SULT1E1P49888 294 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 NNTQ13423 1086 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 CCDC14Q49A88 953 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 ARID3BQ8IVW6 561 aaPredicted RBP22.69■■□□□ 1.22
C9orf3-222ENST00000496567 SMARCD2Q92925 531 aa22.69■■□□□ 1.22
C9orf3-222ENST00000496567 PGAP3Q96FM1 320 aaPredicted RBP22.69■■□□□ 1.22
C9orf3-222ENST00000496567 CALR3Q96L12 384 aaKnown RBP22.69■■□□□ 1.22
C9orf3-222ENST00000496567 CNPY3Q9BT09 278 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms